Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00879 ATGGCGGCACCAGTTGTCGACGCTGAGTATCTCAAGGAAATCGAGAAGGCTCGTCTGGACCTTCGTGCTCTCATCTCCAGCAAAAACTGCGCACCTCTTATGCTTCGTTTGGCATGGCACGATGCTGGAACCTATGATGCTAAGACTAACACGGGAGGTCCTAATGGTTCAATTAGAAATGAGACAGAATTGAGACATAGCGCAAATAATGGTTTGAAAAAAGCAGTGGAATTTTGtgAAGAAGTGAAGGCCAAACATCCAAAAATTACGTATGCAGACCTTTATCAGCTCGCTGGTGTTGTGGCCGTAGAGATCACCGGAGGCCCTCCAATTGACTTTATCCCTGGCAGAAAGGATTCAAAGGAATCCCCGGAAGAAGGGCGCCTTCCGGATGCCAAACAAGGTGCATCGCATTTAAGGGATATTTTCTATCGGATGGGTCTAACAGATAAAGACATTGTGGCTCTTTCTGGAGGCCACACTTTGGGTAAGGCACATCAAGAACGATCGGGCTTTGAAGGCCCATGGACAAGGGACGTTTTGAAGTTTGATAACTCATATTTTGTGGAACTACTGAAAGGGGAGTCAAAGGACCTGTTGCAGCTTCCCACGGACAAGGCTCTAGTGGAGGATCCTCGGTTCCGCCACTATGTTGAGCTGTATGCAAAGGATGAGGATAGATTCTTTGCAGATTATGCAGCCTCTCACAAAAAACTATCAGAGCTGGGCTTCAATCCACCACCTTCCAAGGTTCTCAAACCTGCTGCTATATTGGCTCTGGGAGCTGTAGGAGTTGCTACTGTGGTGATCCTGGGCTACTTATTTGAAGTGAAAAGAATAATCAACTG 848 0.4682 MAAPVVDAEYLKEIEKARLDLRALISSKNCAPLMLRLAWHDAGTYDAKTNTGGPNGSIRNETELRHSANNGLKKAVEFCEEVKAKHPKITYADLYQLAGVVAVEITGGPPIDFIPGRKDSKESPEEGRLPDAKQGASHLRDIFYRMGLTDKDIVALSGGHTLGKAHQERSGFEGPWTRDVLKFDNSYFVELLKGESKDLLQLPTDKALVEDPRFRHYVELYAKDEDRFFADYAASHKKLSELGFNPPPSKVLKPAAILALGAVGVATVVILGYLFEVKRIIN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00879 282 CDD ascorbate_peroxidase 3 247 - -
Bva08g00879 282 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 2 278 IPR044831 GO:0004601|GO:0034599
Bva08g00879 282 SUPERFAMILY Heme-dependent peroxidases 23 247 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Plant ascorbate peroxidase signature 220 244 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Plant ascorbate peroxidase signature 146 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Plant ascorbate peroxidase signature 168 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 Gene3D - 18 243 - -
Bva08g00879 282 MobiDBLite consensus disorder prediction 112 134 - -
Bva08g00879 282 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 ProSiteProfiles Plant heme peroxidase family profile. 22 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 MobiDBLite consensus disorder prediction 115 134 - -
Bva08g00879 282 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
Bva08g00879 282 Gene3D Peroxidase, domain 2 130 236 - -
Bva08g00879 282 Pfam Peroxidase 20 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva08g00879 282 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Bva08g00879 282 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 2 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00879 Bva-Chr8 4506898 4508770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00879 89 239 Peroxidase AT4G16270 32.984 4.45e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00879 K00434 - sly:101264583 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02845 06 17834292 17838213 Bva08g00879 08 4506898 4508770 ECH
Bva12g02083 12 16271682 16276190 Bva08g00879 08 4506898 4508770 ECH
Bva08g00879 08 4506898 4508770 Bva08g00879 08 4506898 4508770 ECH