Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00869 ATGGAAGACGCTGAAAAACTACCGTTGCCTCGTGCTTTCCTTGACTTTCTGAAGGAGAACGAGCTTGACCCTTCGATTTATACCGCAATTGATTCCATTCCACGGTACATTCGATTGAAACCTGGGTGTGAAGCTTATATTGAAGAGGTTCAAGCAGAGATGAAATGTAAACTCCGGAAAGAGGATTGGTTGGCAGGATTTTACTCTAGTCCACCTGATATTCAGATTGCTAGCTCAAAGGCATACCGAGAAGGGAAGATGTGTGTGTTTTTGTGTTTGGGAGGAAACAGTTCAACGTGGTTGAACACGGCAGTGCTTGTAACTTGCCTGAGAAATTTCCCCAAAAACCGTGGCCCTGTCTCTGGCATTCTCAAGGGTTATGTAGGGCTCAGCACTGCAATCTTCACAGACATATGCACTGCTCTGTTCTCCTCTGACCCTTCTACCTTTCTGCTAATGCTTGCCATTGTTCCTGCGGTTATTTGCTTCATTGCTGTTCTCTTTCTTCGTGAATCTCCACCAGCTTCCACCTttgcagaagaaaaacaagaaacccAGTTCTTCAATATATTCAATATAGTTGCTATCACAGTAGCAGTCTACCTCTTGGCCTTTGACATCACTGGACGCCATGAAATGGTAAAAACTTTGGATTTCTGGGTTGTGTTTGTGTCATTTCTTTGTGGCGTGGGAACAGGACTTTGTGTGATGAACAACATGGGACAGATAGGACTAGCACTAGGTTACTCCGATGTATCCatattcatttcattcatCAGCATATGGGGCTTCTTTGGACGCATTTTTTCTGGCTCACTCTCAGAATACTTCATCAGAAAATCAGCAATGCCAAGGCCACTTTGGAATGCTGCTTCTCAAATTCTCATGTGTCTGGGATACGTTGCAATGGCCATGGCCCTGCCAGGATCACTCTACATTGGGTCAATGATAGTAGGAATATGCTATGGAGTCCGTTTTGCTGTGACAGTGCCGATAGCTTCAGAACTATTCGGCCTCAAATACTTTGGTTTACTATACAACATTATCATTCTCAACCTTCCGCTGGGTTCCGTCATCTTCTCCGGTCTCATTGCTGGTTTTCTGTATGATGCACAAGCCACAAGTGTACCTGGAGGGGGGAACGTTTGCATTGGGCCAAATTGTTATATGCTTGTGTTTGTGATAATGGCCATTACTTGTGTTCTGGGATGTGGGTTGGACTTGTTTCTGGCACTTAGAACAAAGAATGTTTATTCCAAGATACAGTTAGAGAAGAGTTATGGTCACTTCAACACCGTAGGAACAGACTTGAAGGGATTGCCACTTAGTAcgtgtaaatttta 1343 0.4267 MEDAEKLPLPRAFLDFLKENELDPSIYTAIDSIPRYIRLKPGCEAYIEEVQAEMKCKLRKEDWLAGFYSSPPDIQIASSKAYREGKMCVFLCLGGNSSTWLNTAVLVTCLRNFPKNRGPVSGILKGYVGLSTAIFTDICTALFSSDPSTFLLMLAIVPAVICFIAVLFLRESPPASTFAEEKQETQFFNIFNIVAITVAVYLLAFDITGRHEMVKTLDFWVVFVSFLCGVGTGLCVMNNMGQIGLALGYSDVSIFISFISIWGFFGRIFSGSLSEYFIRKSAMPRPLWNAASQILMCLGYVAMAMALPGSLYIGSMIVGICYGVRFAVTVPIASELFGLKYFGLLYNIIILNLPLGSVIFSGLIAGFLYDAQATSVPGGGNVCIGPNCYMLVFVIMAITCVLGCGLDLFLALRTKNVYSKIQLEKSYGHFNTVGTDLKGLPLSTCKF 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00869 447 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 86 214 - -
Bva08g00869 447 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 212 427 - -
Bva08g00869 447 Gene3D MFS general substrate transporter like domains 76 406 IPR036259 -
Bva08g00869 447 SUPERFAMILY MFS general substrate transporter 87 416 IPR036259 -
Bva08g00869 447 CDD MFS_Mch1p_like 87 404 - -
Bva08g00869 447 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 86 214 - -
Bva08g00869 447 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 212 427 - -
Bva08g00869 447 Pfam Nodulin-like 85 212 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00869 Bva-Chr8 4461848 4464094 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00869 212 425 Nodulin-like Gene Family AT4G34950 70.093 2.60e-109 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00869 - - sspl:121786526 446.047