Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00858 ATGGCGGACATGGTGAAGCAAATCTTAGCAAAGCCGATCCAGTTAGCTGACCAAGTCGCTAAGGCTGCTGATGAAGCTAGCTCTTCGTTCAAGCAGGAATGTGCAGAGATCAAATCCAAAACAGAGAAGCTTGCAGCGCTTCTCCGGCAAGCTGCAAGAGCCAGCTCCGACCTCTACGAGCGCCCCACACTGCGGATTGTTGAAGACACCGAACAAGTCCTTGACAAAGCTCTTCAACTGGTGCAGAAATGCCGCACCAATGGCCTCGTGAAGCGCGTCTTCACCATCATTCCCGCCGCAGCCTTTCGTAAAATGTCTTCTAACCTGGAGAATTCAATCGGTGATGTGTCTTGGCTCCTCCGGGTCTCTACTCCGGCTGAGGATCGTGGCGACGAGTATATGGGTCTTCCTCCTATTGCGGCAAATGAACCAATCCTAGGTCTTATATGGGAGCAGGTTGCGATTCTCCATACAGGGTCTCTCGAAGATCGATCTGATGCGGCGGCTTCGCTGGTAACACTTGCTCGGGACAACGATCGATATGGAAAGTTGATCATCGAGGAAGGGGGAGTTGGACCCTTGTTGAAATTGATCAAAGAGGGTAAGATGGAAGGTCAAGAGAATGCTGCAAGAGCAATTGGGCTTCTAGGTCGTGACCAGGAAAGCGTTGAGCTCATGATCCATGCTAGTGTATGCTCAGTGTTTGCGAAAATCCTCAAAGAAGGCCCCATGAAAGTCCAAGCGATGGTGGCTTGGGCTGTATCAGAGCTTGCGGCGAATTTTCCCAAATGTCAAGATCTTTTTGCCCAGCACAATATAATACGCTTACTTGTCAGCCATCTTGCATTCGAAACAGTTCAAGAACACAGCAAGTATGCCATTACTAGCATAAAACCCACATCAATTCTCGCAGTTGTGATGGCAAGTAATAATTCCAATGCCGATATAATGAAAAATGCCAATGATGACGATGACAAGCAACTTCAGAGTCGAATACCGCATCCCTTGGGTAATGAAACCCCAAATCAGATGCATAATGTGGTCACAAGTACAATGGCAATGAATGCTGCAGCCAAGCAGTCCAAGCAAGTCCATGGAGCAAATCAGAACCCTCAACCTAATCAACCCAAAAGCAACGGCCTTAGCAATGGCAAGCAAAACCATCTAGCTCACCACCAGCAAAATCATTCATCTTCGGGAATTAACATGAAAGGAAGAGAACTTGAAGACCCCCAGACTAAGGCCAGAATGAAGGCAATGGCAGCAAGAGCCCTGTGGCAACTTGCAAAGGGTAACTCACCCATTTGTCGTAGCATTACAGAATCAAGGGCTCTACTCTGTTTTGCAGTTCTCCTTGAGAAAGGGCCTCAAGAAGTACAGTACAATTCTGCCATGGCAGTGATGGAGATTACCGCAGTGGCAGAGAAAGATGCTGAATTGAGAAGGTCTGCCTTCAAGCCAAATTCTCCTGCTTGCAAAGCAGTTGTTGATCAGTTGCTTAAGATCATCGAGAAAGCTGATTCAGACCTCCTAATCTCTTGCATCAAGACTATTGGGAATTTGGCGAGGACATTTCGAGCCACTGAAACAAGGGTGATTGCTCCCTTAGTAAAACTTCTTGACGAAAGAGAGGCTGAAATATCAAGGGAGGCATCGATTGCCCTCACAAAATTTGCCTGCACAGAAAATTACCTTCACCTAGATCACTCAAAGGCAATTATAGGTGAAGGCGGGGCAAAACATTTGATTCAGCTGGTATATTTTGGAGAACAGATTGTTCAAATTTCAGCATTAGCTCTTCTATGCTACATTGCATTGCATGTGCCAGACAGCGAGGAACTTGCCCAAGCAGAGGTTCTCACAGTGCTTGAATGGGCATCCAAGCAATCCTACATGACGCAAGATGAAACGCTAGAGACATTGTTGCAAGAAGCAAAGAGTCGGTTGGAGCTTTACCAGTCTAGAGGTTCAAGAGGATTCCataaattacatcaata 1997 0.4657 MADMVKQILAKPIQLADQVAKAADEASSSFKQECAEIKSKTEKLAALLRQAARASSDLYERPTLRIVEDTEQVLDKALQLVQKCRTNGLVKRVFTIIPAAAFRKMSSNLENSIGDVSWLLRVSTPAEDRGDEYMGLPPIAANEPILGLIWEQVAILHTGSLEDRSDAAASLVTLARDNDRYGKLIIEEGGVGPLLKLIKEGKMEGQENAARAIGLLGRDQESVELMIHASVCSVFAKILKEGPMKVQAMVAWAVSELAANFPKCQDLFAQHNIIRLLVSHLAFETVQEHSKYAITSIKPTSILAVVMASNNSNADIMKNANDDDDKQLQSRIPHPLGNETPNQMHNVVTSTMAMNAAAKQSKQVHGANQNPQPNQPKSNGLSNGKQNHLAHHQQNHSSSGINMKGRELEDPQTKARMKAMAARALWQLAKGNSPICRSITESRALLCFAVLLEKGPQEVQYNSAMAVMEITAVAEKDAELRRSAFKPNSPACKAVVDQLLKIIEKADSDLLISCIKTIGNLARTFRATETRVIAPLVKLLDEREAEISREASIALTKFACTENYLHLDHSKAIIGEGGAKHLIQLVYFGEQIVQISALALLCYIALHVPDSEELAQAEVLTVLEWASKQSYMTQDETLETLLQEAKSRLELYQSRGSRGFHKLHQ 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00858 665 PANTHER - 1 661 - -
Bva08g00858 665 Coils Coil 37 57 - -
Bva08g00858 665 SMART arm_5 566 606 IPR000225 GO:0005515
Bva08g00858 665 SMART arm_5 177 218 IPR000225 GO:0005515
Bva08g00858 665 SMART arm_5 219 259 IPR000225 GO:0005515
Bva08g00858 665 SMART arm_5 432 472 IPR000225 GO:0005515
Bva08g00858 665 SMART arm_5 488 523 IPR000225 GO:0005515
Bva08g00858 665 PANTHER ARMADILLO REPEAT ONLY 4 1 661 - -
Bva08g00858 665 MobiDBLite consensus disorder prediction 357 402 - -
Bva08g00858 665 MobiDBLite consensus disorder prediction 357 407 - -
Bva08g00858 665 Gene3D - 150 330 IPR011989 -
Bva08g00858 665 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Bva08g00858 665 Gene3D - 393 648 IPR011989 -
Bva08g00858 665 Gene3D - 2 122 IPR036537 GO:0007166
Bva08g00858 665 SUPERFAMILY ARM repeat 154 633 IPR016024 -
Bva08g00858 665 Coils Coil 635 655 - -
Bva08g00858 665 MobiDBLite consensus disorder prediction 317 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00858 Bva-Chr8 4417756 4420163 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00858 - - mesc:110609523 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01518 11 14424136 14426666 Bva08g00858 08 4417756 4420163 BWGD
Bva08g00858 08 4417756 4420163 Bva08g00858 08 4417756 4420163 ECH