Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00857 ATGCTCTCCTCAATAACTCCTCCGCCTCTCGGACTTACCGTTACCAATACAGCCTGTAAATCCGTTTCTTCGCCGCCACGAACTGCCAGATTCCGGCCAATCGTCGCTTTTTCCACGGCAACTGCCACCGACGCTCGCTCTACCTGGACGGACCAGCCAAGGTCTTCTTCGTACCTGAGCTCTCGAGGTATGGCTTCTTGCACATCGCTCTATGAGATTCTAAGTATTCCGGCCGCCGCATCGAATCAAGAGATCAAGGCAGCGTACCGGCGATTGGCGAGAGTTTGCCATCCCGATGTGGCGACGATGGATCAGAAACACTCGTCGGCAAACGAGTTCATGAAGATTCATGCTGCCTATTCCACTTTATCGGATCCCGAAAAGCGTGCTGATTACGACAGGAGGCTTTTCACGAGGCATCAACCGCCGTTGACCACCGCATCAAGATTTTCCGGCTATACTTGTCGGAATTGGGAAACGGACCAGTGCTGGTA 494 0.5324 MLSSITPPPLGLTVTNTACKSVSSPPRTARFRPIVAFSTATATDARSTWTDQPRSSSYLSSRGMASCTSLYEILSIPAAASNQEIKAAYRRLARVCHPDVATMDQKHSSANEFMKIHAAYSTLSDPEKRADYDRRLFTRHQPPLTTASRFSGYTCRNWETDQCW 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00857 164 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Bva08g00857 164 Gene3D DnaJ domain 56 152 IPR036869 -
Bva08g00857 164 PANTHER - 13 164 - -
Bva08g00857 164 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Bva08g00857 164 CDD DnaJ 71 125 IPR001623 -
Bva08g00857 164 SMART dnaj_3 68 128 IPR001623 -
Bva08g00857 164 PRINTS DnaJ domain signature 89 104 IPR001623 -
Bva08g00857 164 PRINTS DnaJ domain signature 71 89 IPR001623 -
Bva08g00857 164 PRINTS DnaJ domain signature 108 128 IPR001623 -
Bva08g00857 164 Pfam DnaJ domain 70 133 IPR001623 -
Bva08g00857 164 SUPERFAMILY Chaperone J-domain 20 132 IPR036869 -
Bva08g00857 164 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 13 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00857 Bva-Chr8 4410524 4411268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00857 60 140 C2H2 Transcription Factor Family AT1G74250 39.326 7.84e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00857 - - gmx:100800959 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00857 08 4410524 4411268 Bva08g00857 08 4410524 4411268 ECH
Bva13g01583 13 9471151 9471817 Bva08g00857 08 4410524 4411268 ECH
Bva14g02311 14 19940640 19941215 Bva08g00857 08 4410524 4411268 ECH