Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00855 ATGGGTACCTGCTTTTCTGCCACCAAAGTCAGTGGCTCAAACAGCAATACTGCGGCCACCGGCGCCGCCGCCACCGCCACCACTGTTAACCACAATCGTAAAGAGAGTACAAGGCCTCAATCGAGGGCGTATAAACAACAACAGTCTTCAAACGATCAACGACAGAAAGTACCAAATGAGACCCAGAAGACTCAGACAAAGAGGAATTCCCAGCAGCAAAGACCCAATAACAAGACTAATACGAGGCGCCAAGGGGGACATATTCCGTGCGGAAAGCGCACAGATTTCGGTTATGACAAAGATTTCGATAGGCGGTATTCACTCGGGAAATTGTTGGGGCATGGACAATTTGGTTACACATATATTGGAGTTGATAAAGCAAATGGGGATCGGGTAGCTGTGAAGAGACTTGAGAAGGGCAAGATGGTTCTTCCTATAGCTGTTGAGGATGTTAAGCGAGAGGTCAGGATATTGAAAGAACTTACAGGCCACGAGAATGTGGTTCAGTTCTATAATGCTTTCGAGGATGATTCTTATGTGTACATAGTTATGGAGTTATGCGAGGGTGGAGAACTGTTAGATAGGATATTGACTAAAAAGGATAGCCGTTATACTGAAAAAGATGCAGCAGTGGTAGTAAGGCAGATGCTCAAAGTTGCTGCTGAGTGTCATTTACATGGTTTAGTACATCGGGACATGAAACCAGAGaattttcttttcaagtcgACCAGAGAAGATTCACCTTTAAAGGCTACGGATTTTGGTTTGTCAGATTTCATAAGACCTGgaAAAAGGTTTCAAGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTAAAACGCAAGTCAGGCCCTGAATCAGATGTTTGGAGTATTGGTGTTATTACATACATATTGCTTTGTGGGAGGCGCCCGTTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCCTGAGAAACAAGCCTGATTTTCGCCGAAAACCATGGCCAACTATAAGCAATGCTGCTAAAGATTTTGTAAAGAAGTTGCTGGTAAAGGACCCTCGGGCAAGATATACTGCTGCTCAGGCTTTATCACATCCGTGGGTTAGAGAAGGAGGAGAGGCATTAGAAATACCTATTGACATATCTGTCCTGAACAACATGAGGAAGTTTGTAAAATATAGTCGATTGAAACAAGTTGCACTGAGGGCATTGGCTAGTACACTCGATGAAGAAGAGTTGGCTGATCTCAAAGATCAATTTCAGGCAATAGACGTTGACAAAAATGGTTCTATTAGTCTGGAAGAGATGAGACAGGCTCTTGCTAAAGATCTACCTTGGAGATTGAAAGATTCGCGTGTACTAGAGATATTGCAAGCGATAGACATCAATACAGACGGGCTTGTGGATTTCTCCGAGTTTGTGGCAGCTACATTGCATGTGCATCAACTGGAGGAACATGACTCGGAGAAGTGGCAGCAACGATCACAGGCTGCATTTGATAAATTCGACCTAGATAAGGATGGATATATTACTCCAGAAGAACTGAGAATGCATACGGGCATGAAAGGCTCCATTGATACACTACTTGAGGAAGCTGATGTTGACAAAGATGGAAGAATCAGTTTATCAGAGTTTCGTAGACTTCTAAGAACTGCAAGCCTTAGTTCGCGAACTGTCAGGAGCCCAACTGCCCGTCCGCGGAAGAATTA 1703 0.4351 MGTCFSATKVSGSNSNTAATGAAATATTVNHNRKESTRPQSRAYKQQQSSNDQRQKVPNETQKTQTKRNSQQQRPNNKTNTRRQGGHIPCGKRTDFGYDKDFDRRYSLGKLLGHGQFGYTYIGVDKANGDRVAVKRLEKGKMVLPIAVEDVKREVRILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILTKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTREDSPLKATDFGLSDFIRPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARYTAAQALSHPWVREGGEALEIPIDISVLNNMRKFVKYSRLKQVALRALASTLDEEELADLKDQFQAIDVDKNGSISLEEMRQALAKDLPWRLKDSRVLEILQAIDINTDGLVDFSEFVAATLHVHQLEEHDSEKWQQRSQAAFDKFDLDKDGYITPEELRMHTGMKGSIDTLLEEADVDKDGRISLSEFRRLLRTASLSSRTVRSPTARPRKN 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00855 567 ProSiteProfiles Protein kinase domain profile. 106 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00855 567 Pfam Protein kinase domain 106 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00855 567 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Bva08g00855 567 ProSitePatterns EF-hand calcium-binding domain. 501 513 IPR018247 -
Bva08g00855 567 SUPERFAMILY Protein kinase-like (PK-like) 104 377 IPR011009 -
Bva08g00855 567 ProSitePatterns EF-hand calcium-binding domain. 459 471 IPR018247 -
Bva08g00855 567 Gene3D Transferase(Phosphotransferase) domain 1 192 387 - -
Bva08g00855 567 ProSiteProfiles EF-hand calcium-binding domain profile. 488 523 IPR002048 GO:0005509
Bva08g00855 567 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Bva08g00855 567 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Bva08g00855 567 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 35 557 - -
Bva08g00855 567 MobiDBLite consensus disorder prediction 41 84 - -
Bva08g00855 567 SMART efh_1 413 441 IPR002048 GO:0005509
Bva08g00855 567 SMART efh_1 450 478 IPR002048 GO:0005509
Bva08g00855 567 SMART efh_1 522 550 IPR002048 GO:0005509
Bva08g00855 567 SMART efh_1 492 520 IPR002048 GO:0005509
Bva08g00855 567 Pfam EF-hand domain pair 413 475 IPR002048 GO:0005509
Bva08g00855 567 Pfam EF-hand domain pair 494 547 IPR002048 GO:0005509
Bva08g00855 567 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 557 - -
Bva08g00855 567 SMART serkin_6 106 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00855 567 CDD EFh 494 548 IPR002048 GO:0005509
Bva08g00855 567 Gene3D Phosphorylase Kinase; domain 1 99 191 - -
Bva08g00855 567 MobiDBLite consensus disorder prediction 1 94 - -
Bva08g00855 567 ProSiteProfiles EF-hand calcium-binding domain profile. 446 481 IPR002048 GO:0005509
Bva08g00855 567 Gene3D - 407 476 - -
Bva08g00855 567 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Bva08g00855 567 Gene3D - 388 546 - -
Bva08g00855 567 ProSitePatterns EF-hand calcium-binding domain. 531 543 IPR018247 -
Bva08g00855 567 ProSiteProfiles EF-hand calcium-binding domain profile. 524 553 IPR002048 GO:0005509
Bva08g00855 567 CDD STKc_CAMK 105 365 - -
Bva08g00855 567 SUPERFAMILY EF-hand 397 550 IPR011992 -
Bva08g00855 567 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00855 Bva-Chr8 4399534 4404173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00855 1 560 EF-hand Containing Proteins AT2G17890 75.000 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva08g00855 Pkinase 5.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00855 K13412 - gmx:100817249 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00855 08 4399534 4404173 Bva08g00855 08 4399534 4404173 ECH