Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00847 ATGGAACCTCAACAACAACATCAGAGCCAGCAACACTCACCAAACGAGGATGGCGGCAGTGGAAAAGGGGGATTTCTCTGCAGGCAAAGTAGTACACGTTGGACTCCCACTACCGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGTGTTAGGTCCCCAAGCGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGAAAGATTGAAGGCAAGAATGTCTTTTACTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAAAAAAGGTTCACTTCTGACGTTCCCATGCAAAGACCATCAACAACTAATGCTGCTGCTGCTACTACTGCTAATTGGAAACCTGAAGAACCCATTCACACCAAGTACTCTAACATATCTTCTAATGGGGTGTCTTCTGCACCTTCTTCTTCGGCTTCTGGGATGGTTACTCTGGGGCAGGTAGGCAACTATGGCTATGGATCTATGACCATGGAGAAGAGCTTTAGGGACTGCTCAATATCAGCTGGAGGTAGCAATTTAAGCCACAACTTGGGATGGGTTGGTGTAGACCCATATTCCTCAGCCTACACCActttatttgacaaaataaggCCAACTGAAGAAACCttagaagaagaacaagaagagatTGGGGCCCCAGAGATTGAAACCCTTCCTCTTTTCCCTATGCACAACGAGGGCATCCATGGCTACTGCAACCACAGGTCTGAATATTCATCATACAATAATGGTGGCTGGTATCACAGCACCGATCATGATGGCTACAAGAACTGTTCTCGCACTTCCCTTGAGCTCAGTCTCAACTCCTACACTCGTAGATCCCCAGATCACATTTA 854 0.4508 MEPQQQHQSQQHSPNEDGGSGKGGFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDVPMQRPSTTNAAAATTANWKPEEPIHTKYSNISSNGVSSAPSSSASGMVTLGQVGNYGYGSMTMEKSFRDCSISAGGSNLSHNLGWVGVDPYSSAYTTLFDKIRPTEETLEEEQEEIGAPEIETLPLFPMHNEGIHGYCNHRSEYSSYNNGGWYHSTDHDGYKNCSRTSLELSLNSYTRRSPDHI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00847 284 Gene3D - 27 92 - -
Bva08g00847 284 SMART HOX_1 29 97 IPR001356 GO:0003677
Bva08g00847 284 MobiDBLite consensus disorder prediction 1 31 - -
Bva08g00847 284 PANTHER PROTEIN WUSCHEL 1 277 - -
Bva08g00847 284 CDD homeodomain 32 94 IPR001356 GO:0003677
Bva08g00847 284 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 277 IPR044555 GO:0003700|GO:0099402
Bva08g00847 284 MobiDBLite consensus disorder prediction 1 17 - -
Bva08g00847 284 MobiDBLite consensus disorder prediction 92 115 - -
Bva08g00847 284 ProSiteProfiles 'Homeobox' domain profile. 27 93 IPR001356 GO:0003677
Bva08g00847 284 Pfam Homeodomain 31 92 IPR001356 GO:0003677
Bva08g00847 284 MobiDBLite consensus disorder prediction 99 115 - -
Bva08g00847 284 SUPERFAMILY Homeodomain-like 26 98 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00847 Bva-Chr8 4349899 4351471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00847 25 232 Wox Gene Family AT2G17950 42.169 2.86e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva08g00847 Homeodomain 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00847 - - vra:106776674 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00847 08 4349899 4351471 Bva08g00847 08 4349899 4351471 ECH