Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00842 ATGGGTATCAGAAAATCGAACAAGCTACCACAAGCAGTTGTTCTGAAGCAAATCATAAAAAGATGCTCGAGTTTTGGAAAGAAACAGGGCTATCTTCCTGCTGATGTGCCAAAAGGCCATTTTGCGGTCTATGTTGGTGAAAACAGAACAAGATACATTATCCCGATTTCATGGTTGGCTCATCCTCAGTTTCAGAGTCTTCTCCAAAGAGCTGAAGAAGAGTTTGGCTTCAACCACGACATGGGCCTCACCATTCCCTGCGAAGAAGTTGTTTTCGAGTCCTTAACCTCGGTCATAAGATA 302 0.4338 MGIRKSNKLPQAVVLKQIIKRCSSFGKKQGYLPADVPKGHFAVYVGENRTRYIIPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCEEVVFESLTSVIR 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00842 100 Pfam Auxin responsive protein 28 98 IPR003676 GO:0009733
Bva08g00842 100 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 100 IPR003676 GO:0009733
Bva08g00842 100 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00842 Bva-Chr8 4327466 4327892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00842 1 100 Calmodulin-binding Proteins AT3G43120 41.905 1.06e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00842 K14488 - gmx:100798840 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01921 06 13046882 13047196 Bva08g00842 08 4327466 4327892 ECH
Bva10g00902 10 6858357 6859062 Bva08g00842 08 4327466 4327892 ECH
Bva08g00842 08 4327466 4327892 Bva08g00842 08 4327466 4327892 ECH
Bva13g01628 13 9768628 9769279 Bva08g00842 08 4327466 4327892 ECH
Bva14g02285 14 19722006 19722746 Bva08g00842 08 4327466 4327892 ECH