Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00830 ATGATGGAGTCGATGGAGTCATGTGTCCCACCCGGGTTTCGGTTCCACCCAACTGATGAAGAACTTGTTGGCTACTATCTCAGGAAGAAAGTAGCTTCTCAGAGGATTGATCTTGACGTTATCAGAGAGATCGATCTCTATCGGATTGAACCGTGGGATCTACAAGAGAGATGCAGGATCGGTTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGACAAGAAGTATCCAACTGGAACAAGGACTAACAGAGCTACCATGGCTGGGTTCTGGAAGGCAACAGGGAGAGACAAGGCAGTGTACGATAAGACAAAACTCATAGGTATGAGGAAGACCCTTGTCTTCTACAAAGGAAGAGCTCCTAATGGACAGAAAACTGATTGGATCATGCACGAATATAGGCTCGAATCTGATGAGAATGGACCTCCACAGGAAGAAGGATGGGTTGTATGCAGAGCattcaagaaaagaaacaacagCCAAACGAAGACTACTCATGAGGGATGGGATTCAAGTTACTTCTATGAGGAAACAAGCGGGATCAGCGCGGTGGTTGACCCAGTTGATTTTATATCAAGACAACCTCAAAGCTTTATAGCTCAAAATTTACTGTGCAAGCAAGAGATAGAAATGGAAAACTTGAGTTTTATGCACTCAGAGCAATTTGTACAGCTTCCTCAGTTAGAAAGTCCGTCTTTGCCATTAAAGAGGCCAAACTCAGTGCCTTTAATATCAGACATTAATGAAGAAGATGAGCAGAATAGGTTATCCAACACGACCGAGAAAGTGACTGATTGGAGAGCTCTTGACAAGTTTGTGGCTTCTCAGCTGAGTCATGAAGACAGGCGTGAACTTAATGGACTGCCCAACTTTGAAACCCATAACAGCTCAGACATGGCAGCATTGCTGTTACTACAGAATAATAGAGATGAAGTGAGCAAGCTAAGCCCATTTTTAAATACAAGCTCAGACTGTGATATTGGGATATGCGTATTTGAAAAGTG 1010 0.4257 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQRIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVVCRAFKKRNNSQTKTTHEGWDSSYFYEETSGISAVVDPVDFISRQPQSFIAQNLLCKQEIEMENLSFMHSEQFVQLPQLESPSLPLKRPNSVPLISDINEEDEQNRLSNTTEKVTDWRALDKFVASQLSHEDRRELNGLPNFETHNSSDMAALLLLQNNRDEVSKLSPFLNTSSDCDIGICVFEK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00830 336 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 5 313 - -
Bva08g00830 336 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Bva08g00830 336 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 313 - -
Bva08g00830 336 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Bva08g00830 336 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Bva08g00830 336 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00830 Bva-Chr8 4279096 4283292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00830 2 335 NAC Transcription Factor Family AT2G18060 62.973 8.31e-161 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva08g00830 NAM 3.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00830 - - aprc:113869508 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00830 08 4279096 4283292 Bva11g01541 11 14544062 14548208 BWGD
Bva08g00830 08 4279096 4283292 Bva08g00830 08 4279096 4283292 ECH