Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00828 ATGATACGCTTTCTGGCCATCTCagctcctcttcttcttttcatgcTTCTATGCGCACCTTTCTTATCGTGCGCCGAGCGTAACGCCGCCGAGATCGAAGCCTTGACCTCTTTTAAGCTCAATCTTCATGACCCCCTTGGAGCTCTCAATGACTGGGATCCATCTACGCCGGCGGCACCATGCGACTGGCGTGGAGTTGCCTGCAACAATGACCGAGTCACCGAGCTGCGTTTACCCATGCTTCAGCTCAGTGGTCGGCTTACTGACCGGATTTCTGACTTACGCATGCTGCGAAAGCTAAGCCTTCGTTCCAATTCCTTCAACGGGACTATTCCTTCGTCACTCTCCAAATGTACTCTTTTACGCGCCGTCTTTTTGCAGTACAACTCACTCTCCGGCAACCTTCCACCGGAGATCGGAAACCTCACCggtcttcaaatttttaacgTCGCACAAAACCAACTCTCTGGCAAAATCCCCAGTGACCTCCCTTTAAGTCTCAAGTACATTGACCTCTCATCGAACGCCTTCTCCGGCGAGATTCCGAGCACCATTGTCAACCTATATCAGCTGCAGCTAATCAACTTGTCATACAACCAGTTTTCTGGTGAAATCCCAGCCAGCTTTGGGGAGCTTCAGCTGCTTCAGTACCTCTGGCTTGACCACAATTTCCTTGGGGGAACTCTACCTTCGGCACTCGCGAATTGCTCTTCCCTTGTTCATCTGAGCGTAGAAGGAAATTCTATTGGGGGTGTAATCCCCGCGGCGATTCCAGCTCTTCCGAAACTGCAGGTGATATCTCTCTCGCGGAACAATCTTACTGGTTCCATTCCTGCTTCCATTTTCTGCAATGTTTCTGTTTATACGCCGTCACTTCGAATCGTTCAACTAGGATTTAATGCTTTAACCCATTTTGTTGGGCCTGAGACAGAAACGTGTTTCAGTGTTGTTCAACTTCTGGATATTCAACACAATCGTATACAGGGGAAGTTTCCCCTGTGGTTAACGAATTTGGCCACAGTAAAAATGCTTGATGTTTCGAACAATGCACTTTCTGGCGAGGTTCCACCAGAAATAGGACACCTCACGAAATTGGAGGAGTTAAAGATGGCCAACAATTCTTTCACAGGCATGATTCCGGtggaaataaagaaatgtgGGTTCCTACGTGTTGTTGATTTTGAAGGAAATAGATTTTCTGGGGAAGTTCCTTCGTTTTTTGGTGATATGACTGGTCTGGAAGTGCTTTCCCTTGGTGGAAATCTGTTCTCTGGTTCAGTTCCGGTGAGTTTTGGTAAACTTTCAGTGCTTCAAACCTTGAATTTGAGAGGCAATAGCTTGAACGGAAGTATGCCTGAGGAGATAATGGGAATGAGCAATTTGAGTACACTGGACCTTAGCGGAAACAAGTTCACGGGTCAAATTTCTGCAAGTATTGGGAATCTGAGTAGATTAATGGTTCTCAATCTGAGTAGCAATGGCTTTTCAGGGAAAATTCCAGCCACTTTGGGGAATCTGTTCAGGTTAGCTACACTTGACTTGAGCAAGCAGAACCTTTCCGGGGAATTGCCATTGGAGCTTTCGGGGCTGCCAAATCTGCAAGTTATTTCTCTGCAGGAGAACAAGTTGTTCGGGGATGTTCCTGAAGGCTTTAGCAGTTTAACGAGTTTGCAATATGTGAATCTCAGCTCAAATGCTTTTTCTGGGCATATTCCTGAAAATTATGGTTTTCTTAGATTACTCGTTGCTCTTTCATTGTCTGATAATCACATTACAGGAACGGTTCCTCCAGATATTGGAAACTGTTCTAATATAGAAATCCTTGAGCTTGGATCTAATTCTTTAACAGGTCATATTCCTACTGATCTCTCTCGCCTTTCCCATTTGAAAGTGCTTGATTTGGGTGGAAACAATTTAACTGGAGATCTGCCTGGGGATATCTCCAAATGCTCTTCATTAGCTGCTCTTTTAGTGGATCACAACCATCTCTCAGGTTCCATACCAGAGTCATTCTCAGAGCTATCAAACCTAACAATGTTGGATCTCTCTGCTAACAATCTTAGTGGGGAAATTTCAAGTAATATTTCAATGATTCCTGGTTTAGTCTACTTCAATGTCTCTGGGAATAACCTTGAAGGTGAGATACCACCAGTGCTGGGATCTCGGTTCAATGATCCTTCTGCATTTGCAGATAATCAGAACTTATGTGGGAAACCATTGGATAGGGAGTGTGCAGATATAGACTCGAGGGACAGGAAGAGGTTGATTGTGTTAGTTGTTCTCATTGCATTTGGAGCTATCTTTCTGGCATTGTGTTGTTGCTTTTACATTTTCAGTCTGTTGAAATGGCGCAAAAGGCTTAAAGAAAGGGCATCtggggagaagaaaaaaagtccTGCTAGGGCGAGTTCTGGAGCAAGTACAGGTCGTGGCAGCACTGATAATGGTGGACCAAAACTTGTCATGTTCAATACCAAAGTTACACTTGCTGAAACGATCGAAGCAACTAGGCaatttgatgaagaaaatgtGCTGAGCAGAACAAGATATGGATTAGTATTCAAGGCCTGCTACAATGATGGAATGGTGCTTTCCATTCGCAGGCTCCCAGATGGATCTCTGGACGAAAATATGTTCAGAAAAGAAGCTGAAGCACTTGGGAAAGTGAGGCACAGGAACTTAACAGTCCTTAGAGGTTATTATGCTGGGCCACCTGACTTGAGGCTTCTAGTTTATGATTACATGCCCAACGGAAACCTTGCAACCCTTCTCCAGGAAGCATCTCACCAAGATGGCCATGTACTAAATTGGCCAATGCGCCACCTCATTGCACTTGGAATTGCCCGTGGTTTAGCCTTCCTACACCAGTCCTCAACGGTTCATGGGGACATGAAACCACAAAGTGTCCTCTTTGATGCAGATTTTGAAGCCCATTTGTCAGATTTTGGCTTAGACCGGTTAACCATAGCCACTCCAGGCGAAGCTTCCACCTCAACTTCAGTTGGCACATTGGGTTATGTATCACCAGAAGCAGTGTTAACAGGGGAAGCCACCAAGGAGTCTGATGTCTACAGCTTTGGCATTGTCCTACTCGAGCTTTTAACAGGAAAGCGACCCGTGATGTTCACACAGGACGAAGATATAGTCAAGTGGGTGAAGAAACAATTGCAGAGGGGTCAAATAACAGAGCTATTAGAACCAGGTTTGCTTGAGCTAGACCCAGAATCATCAGAGTGGGAAGAGTTCTTGCTGGGTATCAAGGTTGGCTTACTCTGCACAGCACCAGACCCTCTTGATCGCCCAACCATGTCTGACATCGTCTTCATGCTCGAGGGTTGCCGGGTCGGCCCAGACATCCCATCCTCCGCCGATCCTACCTCTCAACATTCGCCGGCGTA 3398 0.4473 MIRFLAISAPLLLFMLLCAPFLSCAERNAAEIEALTSFKLNLHDPLGALNDWDPSTPAAPCDWRGVACNNDRVTELRLPMLQLSGRLTDRISDLRMLRKLSLRSNSFNGTIPSSLSKCTLLRAVFLQYNSLSGNLPPEIGNLTGLQIFNVAQNQLSGKIPSDLPLSLKYIDLSSNAFSGEIPSTIVNLYQLQLINLSYNQFSGEIPASFGELQLLQYLWLDHNFLGGTLPSALANCSSLVHLSVEGNSIGGVIPAAIPALPKLQVISLSRNNLTGSIPASIFCNVSVYTPSLRIVQLGFNALTHFVGPETETCFSVVQLLDIQHNRIQGKFPLWLTNLATVKMLDVSNNALSGEVPPEIGHLTKLEELKMANNSFTGMIPVEIKKCGFLRVVDFEGNRFSGEVPSFFGDMTGLEVLSLGGNLFSGSVPVSFGKLSVLQTLNLRGNSLNGSMPEEIMGMSNLSTLDLSGNKFTGQISASIGNLSRLMVLNLSSNGFSGKIPATLGNLFRLATLDLSKQNLSGELPLELSGLPNLQVISLQENKLFGDVPEGFSSLTSLQYVNLSSNAFSGHIPENYGFLRLLVALSLSDNHITGTVPPDIGNCSNIEILELGSNSLTGHIPTDLSRLSHLKVLDLGGNNLTGDLPGDISKCSSLAALLVDHNHLSGSIPESFSELSNLTMLDLSANNLSGEISSNISMIPGLVYFNVSGNNLEGEIPPVLGSRFNDPSAFADNQNLCGKPLDRECADIDSRDRKRLIVLVVLIAFGAIFLALCCCFYIFSLLKWRKRLKERASGEKKKSPARASSGASTGRGSTDNGGPKLVMFNTKVTLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLPDGSLDENMFRKEAEALGKVRHRNLTVLRGYYAGPPDLRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSTVHGDMKPQSVLFDADFEAHLSDFGLDRLTIATPGEASTSTSVGTLGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGIKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQHSPA 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00828 1132 Pfam Protein kinase domain 849 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00828 1132 SUPERFAMILY L domain-like 509 721 - -
Bva08g00828 1132 SMART LRR_sd22_2 458 484 - -
Bva08g00828 1132 SMART LRR_sd22_2 626 655 - -
Bva08g00828 1132 SMART LRR_sd22_2 260 287 - -
Bva08g00828 1132 SMART LRR_sd22_2 338 370 - -
Bva08g00828 1132 SMART LRR_sd22_2 674 697 - -
Bva08g00828 1132 SMART LRR_sd22_2 530 562 - -
Bva08g00828 1132 Gene3D Ribonuclease Inhibitor 164 309 IPR032675 -
Bva08g00828 1132 Gene3D Ribonuclease Inhibitor 460 747 IPR032675 -
Bva08g00828 1132 SUPERFAMILY Protein kinase-like (PK-like) 819 1119 IPR011009 -
Bva08g00828 1132 Gene3D Ribonuclease Inhibitor 385 459 IPR032675 -
Bva08g00828 1132 Gene3D Ribonuclease Inhibitor 28 163 IPR032675 -
Bva08g00828 1132 Pfam Leucine rich repeat 508 566 IPR001611 GO:0005515
Bva08g00828 1132 Pfam Leucine rich repeat 166 223 IPR001611 GO:0005515
Bva08g00828 1132 Pfam Leucine rich repeat 604 663 IPR001611 GO:0005515
Bva08g00828 1132 Pfam Leucine rich repeat 413 471 IPR001611 GO:0005515
Bva08g00828 1132 Pfam Leucine rich repeat 318 374 IPR001611 GO:0005515
Bva08g00828 1132 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 9 1128 - -
Bva08g00828 1132 SUPERFAMILY L domain-like 30 334 - -
Bva08g00828 1132 SMART LRR_typ_2 410 433 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 674 698 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 626 650 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 94 118 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 530 553 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 578 602 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 212 236 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 338 362 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 188 211 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 142 166 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 260 284 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 458 482 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 554 576 IPR003591 -
Bva08g00828 1132 SMART LRR_typ_2 434 457 IPR003591 -
Bva08g00828 1132 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Bva08g00828 1132 ProSiteProfiles Protein kinase domain profile. 839 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00828 1132 Gene3D Phosphorylase Kinase; domain 1 813 914 - -
Bva08g00828 1132 Gene3D Ribonuclease Inhibitor 310 384 IPR032675 -
Bva08g00828 1132 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 1128 - -
Bva08g00828 1132 MobiDBLite consensus disorder prediction 792 819 - -
Bva08g00828 1132 Gene3D Transferase(Phosphotransferase) domain 1 915 1118 - -
Bva08g00828 1132 SUPERFAMILY L domain-like 319 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00828 Bva-Chr8 4263985 4268098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00828 11 1132 Receptor kinase-like Gene Family AT4G36180 70.547 0.0 1546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Bva08g00828 Pkinase 1.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00828 - - gmx:100795838 1825.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00828 08 4263985 4268098 Bva08g00828 08 4263985 4268098 ECH