Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00802 ATGTCTACATTGTCGCCGATCTCATCTTCCGACTATTCGATCCTTTTCGACCTCGACGAGTCTCTGGCTGCCGCCGAGGAAGCATGCAGGATATTTTCCGCCACAAAGtgctttgtctcaaacttgcCCCTGGTTGATGCTAATGACATTAATAAGCACAACCAAGATGTTTGTTCGGTTTGCATGGAAGCCTTTCGTCAACACAACTCCGCCGGCGCTGAGGGGAACAAAAGACTCCCCTGCGGCCACGTGTACCATGCAACCTGCATCACAACCTGGCTTTCCCGCGCCACCTCTCCCTCCACTAGGTCTAGGACCACTACCATGAATAGATATATCattccttatttcttttcgtattcattctttaatttgttaattcctaatttcttcttttctccgGCTTCAGAAATTACCACTTA 422 0.41 MSTLSPISSSDYSILFDLDESLAAAEEACRIFSATKCFVSNLPLVDANDINKHNQDVCSVCMEAFRQHNSAGAEGNKRLPCGHVYHATCITTWLSRATSPSTRSRTTTMNRYIIPYFFSYSFFNLLIPNFFFSPASEITT 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00802 140 Pfam Ring finger domain 57 96 IPR001841 -
Bva08g00802 140 SUPERFAMILY RING/U-box 38 99 - -
Bva08g00802 140 ProSiteProfiles Zinc finger RING-type profile. 58 103 IPR001841 -
Bva08g00802 140 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE 11 103 - -
Bva08g00802 140 SMART ring_2 58 102 IPR001841 -
Bva08g00802 140 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 113 IPR013083 -
Bva08g00802 140 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 11 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00802 Bva-Chr8 4132977 4133399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00802 34 108 C3H Transcription Factor Family AT3G02340 34.615 8.24e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00802 - K22378 gmx:102669154 77.7962