Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00795 ATGGCGGGTTTATTCTCATTAGGCGGTGGAGGAGGAAGAGGGAGCAGCAACCCAGAGGAAGAGCAGCACCATCATCACCAAGGACATAATCCGGTCACGGAAATTGCTCCTCCAGAGAGCTTATTTTGGTACAAGAATAACGAAGATGTTTCCTCTTACAGAGGTTTCGAGCTATGGCAGCAGCACGAGCAACTCCTCCCGCAAGCTCAAGCGCGACAATTCCATCATCATCCACATCCTCAGCAAGATCTTTACTCGTCAGCAGCTGCGCTAGGGGTGGGACCCAGCAGGAGCTCGATCAACGTCTCCGATGATCAGTCATCGTCGAGATCGGGGTTCATGGTGATGCGAAGCAGCGGAGGAATAAGCTGCCAAGACTGTGGGAACCAAGCAAAGAAGGATTGCCCTCACATGCGGTGCAGGACTTGTTGCAAAAGCCGAGGCTTCGAATGTCAAACCCATGTCAAAAGCACTTGGGTTCCGGCTCCCAAACGTCGCGAGAGACAACACCAACACCAACACCAACACCAACTAGCGGCTATGCAGCAGCAAGAGCAGCAACTACAACTTGGCGGAGATAATTCCAAAAGGCAGAGAGATAATAACCCAAGTTCTTCGGCTCTAGCCTGCACTCGTTTACCCACCAACCCTTCTTCCTCAGAGCACGGAAATTTGCCATCCGTCCTGAGCTCTCCTGCGGATTTTCGTTGCGTGCGTGTTAGCTCCATGGACGACCCTGACGAACAGTACGCATATCAGACTGCCGTTAACATTGGAGGACATGTGTTCAGAGGAATTCTCTACGACCATGGCCCCGACAATAATTACATGGCATCCGAGGGTTCTTCCGGTGCTGTTGTCGGAGTTCAACCTTTGAACCTCATTGCTGCCGCCCCGAGCTTACCCTCTGGCAGTGGCGATGCTATGGTTTCCTCTACGGGGGCGCTTGTGGATCCTTCTTCTTTGTATCCAGCTCCACTTAACACCTACATGGCTGGTAGCGGTACGCAATTCTTCCCACACCCAAGATcttg 1034 0.5213 MAGLFSLGGGGGRGSSNPEEEQHHHHQGHNPVTEIAPPESLFWYKNNEDVSSYRGFELWQQHEQLLPQAQARQFHHHPHPQQDLYSSAAALGVGPSRSSINVSDDQSSSRSGFMVMRSSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFECQTHVKSTWVPAPKRRERQHQHQHQHQLAAMQQQEQQLQLGGDNSKRQRDNNPSSSALACTRLPTNPSSSEHGNLPSVLSSPADFRCVRVSSMDDPDEQYAYQTAVNIGGHVFRGILYDHGPDNNYMASEGSSGAVVGVQPLNLIAAAPSLPSGSGDAMVSSTGALVDPSSLYPAPLNTYMAGSGTQFFPHPRS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00795 344 MobiDBLite consensus disorder prediction 175 227 - -
Bva08g00795 344 PANTHER PROTEIN SHORT INTERNODES 1 342 - -
Bva08g00795 344 MobiDBLite consensus disorder prediction 162 227 - -
Bva08g00795 344 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 123 165 IPR006510 -
Bva08g00795 344 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 225 272 IPR006511 -
Bva08g00795 344 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 342 IPR007818 GO:0003700|GO:0006355
Bva08g00795 344 MobiDBLite consensus disorder prediction 1 34 - -
Bva08g00795 344 Pfam Domain of unknown function (DUF702) 121 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00795 Bva-Chr8 4091260 4093847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00795 1 344 C2H2 Transcription Factor Family AT3G51060 46.667 5.18e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bva08g00795 DUF702 2.4e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00795 - - tcc:18610831 389.423