Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00792 atgGCTGAGCTTGCTGTATCAACAGTTGTTGAATATCTTTCAGAACTGCTACTTGAAGAAGCAGTTTCACTACACAAAGTACTGGATGGGGTACGAGAGAAAGTAGATCAACTGAAGAACGAATTAAAATGGATGCAGTGTTTTTTGAGGGATGCAGAAGCCAAACAGGAAGGCAACCAACGAGTTCGCCGGTGGGTTTCTGACATTAGAGATACAGCTTTTGAAGCAGAGGAACTGATAGAAACCTATGCGTACAAggcagctactcaaaacagATGGGACAGAGTGTTCAGACCCATACGTTTATACAAGGTgggaagagaaattgaaaaactCCAAAAGAAGATAGAGGCCATATCCGCACAGCGTGAAAAATACGGACTTGAAAGGAGCAATCAAGATGAATTGAAGGTGGCAAACGGTGCAAACGAAAGGTTGAGGCACTGGAGACAGCCATCACCATATTCTGAGGGAGAGTATGTTATTGAGCTCGAAGATCACATAGAGTTGCTGCTTATGCAACTGCTGAAATTGGAGCCAAGGCGTCACGTGGTTTCTATTGTAGGAATGGGGGGTTTAGGAAAAACCACTGCGGCCAAGAAATTGTATCATCATGGTAAAGTTATTGaacattttgattttagagCTTGGATTTATGTCTCTAAAGAATACAGAAGAAGAGACATTCTTCTAGGAATTCTCAGGAAAGCAAATGCTCTCGATGGGGATGCAATTGAAAGATCGGAGGAAGAGTTGATGTACATGCTGCGCAATTTCCTGGATGATAGGAGGTATTTAGTAGTTCTTGATGACATCTGGAGCATGGAGGTGTCGGATGGTCTAGAATCTTCATTTCCTAAAGGGAGGAAGGGAAGTAAAGTCATGCTCACAACTAGAAATAGGGAAGTTGCTTTACATGCAGATGCAGGTAGCATTCCCCATCAACTACGAACACTGACAGAGGATGAAAGTTTGAAATTGCTATGCAACAAAGCATTCCCTGGTATGGACGAGATACCCCCTGAGTTGGAAAATCTTTCCAGAGAAGTTGTCATAAAATGTGGCGGTTTGCCTTTGGCTGTGATAGTGGTAGGTGGTTTACTATCTAGGAAACGAGGGTCGACTGAGGAATGGATGCAAGTGCTCAAAAATATAAGCTGGCACTTGCTAGAAGGTGACAGCAGGATAGCAGGAATTTTGACCCTAAGCTACAAAGATTTGCCTCCTCACTTAAAATCATGCTTTCTCTATTTGGGTCTTTTCCCGGAAGATATGACCattcagaagaaaaaattggtCCGCCTTTGGGTTGCAGAAGGTTTCTTACCACAAGAAGGTGAAGAAACAGCAGAAGGTGTAGCTCAGAAATGCTTGGATGAGTTGATTGGCAGGTGCATGATTCAAGTAGAAACGGTAAGCTCACTAGGCAGGGTTAAAGCAATTCGCATTCATGATCTTCTTAGAGATTTTTCGGtctcaaaaggaaaagaagaatattttttcaagaCATATCTTGGCACGGAGCGCTCATCTGCATCTGAATTAACTAAATCCCGGAGGCACGCCATACAATCTTGCTTTGACCGGTATGATTTCTTAAAACACAATGCCCAGTATTCACGTTCGCTCCTGTTCTTCAATAGAGAGTAtaatgaagaaataataagGAGAATCAGGTTTGGTAGGCCTCAAAAGAAGTTGAATTTCATCTACAGGAAATTCATGCTCCTCAGGGTATTAGAGTTTGATGGTGTTCGTGTAGTTTGCTTGCCAAATACAATAGGAGACCTGATTCAATTAAGGTACCTAGGACTGAGGAAGACTAATTTAGAAGAAGAGCTACCAGCTTCCATTGGAAACTTGCAGAACCTACAGACACTTGATCTAAGGTACTGCTGTTTTCTTAAGAGGATACCAGATGTAATTTGGAAGATGGTGAACCTGAGGCATTTACTCCTGTATACTCCATTTGATTCTCCAGATAGTTGGCATCTTAGAATGGACACATTAAGCAATTTACAAAGCCTACCATACATAGAGGCTGGACCCTGGATAGATAGGGGATTAGCCAACATGAGCAATATTAGGCAATTGGGGATATATGATTTGTCAAGAACAATGGTGAATTCAGTTCTTTCTATTGCACCACAATTACGCCACCTTCGTTCACTTTCTTTAACACTCCAATCTGAACAGGAGGAATTTCCAATCCTCATGCAGCTTTCTCAATGTACTGATCTCATCAAGCTTTCACTGAACGGGAAGATCAAGAAGCTACCTGATCCGCATGAATTCCCACCAAACCTTATGAAACTAACCTTACATAACTCCCTCCTACAGATGGAATCCATTGCCAAACTCGAGCGATTAACAAATCTGAAAACGCTTGTTCTCGGGAAGGGGGCGCACAATTGGCcagaattgattttttctgCAGAAGGGTTTCCACAGTTGAGAATTTTGCGGTTTGATCTTTTGAGGGAATTAGAGGAGTGGAAAGTTGAGGAAAGGGCATTACCAAGGCTTGAGCATGTGGTTATTAATCGCTGCGAGAAGCTGAAAAAGATTCCTGAAGGACTCAAGGCTGTTACAGCtctcaagaaaataaagattataGGAATGCCAGTGGAATTTGAACACAGACTTAGAACTATTGACTTGCCTGACTTCCAAATTACTCCATCAATTGAATCAACCACTGACGTTCTGGCAATTGATCGTTCTGCAGATGTCAAACGCAGGCGCAACGTTGGTAGGTG 2759 0.4038 MAELAVSTVVEYLSELLLEEAVSLHKVLDGVREKVDQLKNELKWMQCFLRDAEAKQEGNQRVRRWVSDIRDTAFEAEELIETYAYKAATQNRWDRVFRPIRLYKVGREIEKLQKKIEAISAQREKYGLERSNQDELKVANGANERLRHWRQPSPYSEGEYVIELEDHIELLLMQLLKLEPRRHVVSIVGMGGLGKTTAAKKLYHHGKVIEHFDFRAWIYVSKEYRRRDILLGILRKANALDGDAIERSEEELMYMLRNFLDDRRYLVVLDDIWSMEVSDGLESSFPKGRKGSKVMLTTRNREVALHADAGSIPHQLRTLTEDESLKLLCNKAFPGMDEIPPELENLSREVVIKCGGLPLAVIVVGGLLSRKRGSTEEWMQVLKNISWHLLEGDSRIAGILTLSYKDLPPHLKSCFLYLGLFPEDMTIQKKKLVRLWVAEGFLPQEGEETAEGVAQKCLDELIGRCMIQVETVSSLGRVKAIRIHDLLRDFSVSKGKEEYFFKTYLGTERSSASELTKSRRHAIQSCFDRYDFLKHNAQYSRSLLFFNREYNEEIIRRIRFGRPQKKLNFIYRKFMLLRVLEFDGVRVVCLPNTIGDLIQLRYLGLRKTNLEEELPASIGNLQNLQTLDLRYCCFLKRIPDVIWKMVNLRHLLLYTPFDSPDSWHLRMDTLSNLQSLPYIEAGPWIDRGLANMSNIRQLGIYDLSRTMVNSVLSIAPQLRHLRSLSLTLQSEQEEFPILMQLSQCTDLIKLSLNGKIKKLPDPHEFPPNLMKLTLHNSLLQMESIAKLERLTNLKTLVLGKGAHNWPELIFSAEGFPQLRILRFDLLRELEEWKVEERALPRLEHVVINRCEKLKKIPEGLKAVTALKKIKIIGMPVEFEHRLRTIDLPDFQITPSIESTTDVLAIDRSADVKRRRNVGR 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00792 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 418 IPR027417 -
Bva08g00792 919 SUPERFAMILY L domain-like 482 878 - -
Bva08g00792 919 Gene3D - 318 403 IPR042197 -
Bva08g00792 919 Coils Coil 102 129 - -
Bva08g00792 919 Gene3D - 4 104 - -
Bva08g00792 919 PANTHER - 40 883 - -
Bva08g00792 919 Gene3D - 404 494 IPR036388 -
Bva08g00792 919 Gene3D Ribonuclease Inhibitor 560 908 IPR032675 -
Bva08g00792 919 PANTHER DISEASE RESISTANCE PROTEIN RP 40 883 IPR044974 GO:0006952
Bva08g00792 919 PRINTS Disease resistance protein signature 259 273 - -
Bva08g00792 919 PRINTS Disease resistance protein signature 619 635 - -
Bva08g00792 919 PRINTS Disease resistance protein signature 184 199 - -
Bva08g00792 919 PRINTS Disease resistance protein signature 354 368 - -
Bva08g00792 919 Coils Coil 21 55 - -
Bva08g00792 919 Pfam Rx N-terminal domain 5 92 IPR041118 -
Bva08g00792 919 Pfam NB-ARC domain 165 404 IPR002182 GO:0043531
Bva08g00792 919 CDD RX-CC_like 28 120 IPR038005 -
Bva08g00792 919 Gene3D - 139 310 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00792 Bva-Chr8 4068586 4072858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00792 184 489 WRKY Transcription Factor Family AT5G45050 24.679 5.35e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00792 - - gmx:100788025 1247.65