Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00786 ATGCATATGGAGTCAACTGGTTTCCGCCTCCAACCCCAAGAAGAATTTGCTCATCAGTTTTCTACATCTTCACCCAACAAATCTGACTACAAACCTTCCTTTTATCAAGCATGGAACCAAACCAGAACATTCAATGGTTTACCTAATAGGTATCTGATTGAAAGCATTACAAATTCGAGGGAACTAGAGCCAAAGTGCTCCGTGATTGATTCACAAGTAAGAACTTCCCAAAGCCAAGACTTTGGATTTTATGGTGGAAAGAGCTTCACCCAACAGTTATTAGCCACTGATGCTCTTGATGTTAATTTACCAAAGCTGAGTGACATGTTAAACAGCCCCTCCAGAGCTGTTAATGAGTTTCATCCACTAAGTCAGCCACAAGAATATTCTCATAGTTTCTTGGCTGGTCGTCATGTAACAGCTAAAGATCTCTTGCCAGCAGAAGTTTTGTATAGTGTTCAACACCCTTTAGATGAAGGAATAAATGTCCTCTCTAAGACTAGAAGATGCAACTTTGGCAGTGTTTCGTCGTCAAGTTCCAATTTATCATCAACCCTAGATTTGCCTACTTCATTGGTTTCATGTTCTTTGGGCTTAAATTCACAAATGTTAGATCTGCATACAAGTTATGGTAGTGGGATAAGGAACGAACTACCCTATGATGCTTTTCGTCTTAATGAAGAAAGCATATGTTTGAGCCACGGCAACATGCAAGGTCGTGAAAACAGTCCATCAAATAATAAAATCTCGGCGTTCATGAAGGGAGCTGCAAGGCCTAAAAGGCCTGGCAATTGCTCTCGACATAAGGAATCATCTGATGCAAAAGTTAAGAAGCCAAGGACATCGTGCCCGCCGCCCCTGAAGGTCAGAAAGGAAAAACTGGGAGACAGGATCCAGGCACTTCAGAGGTTAGTGGCACCTTTTGGGAAGACAGATACAGCATCTGTATTGACCGAAGCTATTGGCTATATCCACTTCCTTCAAGACCAAATCCAGACCTTGAGTGTGCCTTATATGAAGTCAACGCAATCGCAAAGCAAGCCCTTTAGAATGCTGAAGTTGGacccaaaagaagaagatggcaAAGAAATGAATAGAGACCTTAGAAGCAGAGGCCTATGTCTTGTGCCCCTTTCATACGCATCATGtgttaattgttatattta 1166 0.4091 MHMESTGFRLQPQEEFAHQFSTSSPNKSDYKPSFYQAWNQTRTFNGLPNRYLIESITNSRELEPKCSVIDSQVRTSQSQDFGFYGGKSFTQQLLATDALDVNLPKLSDMLNSPSRAVNEFHPLSQPQEYSHSFLAGRHVTAKDLLPAEVLYSVQHPLDEGINVLSKTRRCNFGSVSSSSSNLSSTLDLPTSLVSCSLGLNSQMLDLHTSYGSGIRNELPYDAFRLNEESICLSHGNMQGRENSPSNNKISAFMKGAARPKRPGNCSRHKESSDAKVKKPRTSCPPPLKVRKEKLGDRIQALQRLVAPFGKTDTASVLTEAIGYIHFLQDQIQTLSVPYMKSTQSQSKPFRMLKLDPKEEDGKEMNRDLRSRGLCLVPLSYASCVNCYI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00786 388 Gene3D - 288 348 IPR036638 GO:0046983
Bva08g00786 388 MobiDBLite consensus disorder prediction 254 288 - -
Bva08g00786 388 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 288 340 IPR036638 GO:0046983
Bva08g00786 388 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 3 384 - -
Bva08g00786 388 PANTHER TRANSCRIPTION FACTOR BHLH110-LIKE 3 384 - -
Bva08g00786 388 SMART finulus 289 333 IPR011598 GO:0046983
Bva08g00786 388 CDD bHLH_AtbHLH_like 288 335 IPR045239 -
Bva08g00786 388 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 278 327 IPR011598 GO:0046983
Bva08g00786 388 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00786 Bva-Chr8 4040561 4043265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00786 277 379 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 66.667 7.77e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00786 - - gmx:100782565 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00786 08 4040561 4043265 Bva08g00786 08 4040561 4043265 ECH