Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00781 ATGATGTTTTCCAGCAGAGACATGCCTTCCCCATCTTCAATGTTCTCAGCCTATGCCTCCATGACTGCCTCAGTTATGCTTATGCGTTCAATGGCGAACGATCTGATACCCCAGCCAATTCGGGGGTACCTTGCCAATGCGTTCCGGTACTTGATCAAGCCTCATTCTCCCAATCTCACCCTTGTCATCGAAGAATCCAGCGGCATAGCACGCAACCAAGTCTATGATGCTGCAGAGGTTTACTTGTCCACTAGAGTTAGTCCCCTCAATGAAAGGCTCAAGATCTTCAAGAGCCCCAAGGAGAAGAGATTGACCATTCGGCTTGAGAAGGGCGAAAAGCTTGTTGATTTCTATGGTGGGGCTGAGCTCAAATGGAGGTTTATCTGTGCAGAGTCCGAGAATAATAACCCCAGTAATAATAACATTGCTATCAGATCAGAAAAGCAATATTTCGAGCTCTGTTTCCACAAGGAGCACAAGGAAATGGTTTTGGACAATTATCTGCCATTCATTCTTGAAAAATCCAAGGAGATGAAAGATGAGGAAAGGGACTTGAAGATGCACACTCTAAACACTTCCTACTGTTATAGTGGGATCAAATGGGATTCCATCAATCTGGAACACCCATCTACTTTTGAGACTCTGGCTATGGAGCCAGAGCTGAAGAAAGCTGTGGTAGAAGATTTGGATAGGTTTGTCAGGAGGAAAGATTTCTACAAGACAGTAGGCAGAGCATGGAAACGTGGGTACTTGCTCTACGGGCCTCCGGGTACCGGAAAATCGAGCTTGATTGCAGCCATGGCTAATCACTTGAAGTTCGACATCTACGACCTGCAACTTGCTAACATAGTTCGAGATGGCGACCTCAGAAAGCTGCTGCTGGCCACTGCAAATAGATCTATTCTGGTAATTGAAGACATTGATTGCAGTGTGGATTTGCCGGAGCGTACTCGGCATGCGGATGCACGTAAGCAAGCTGACGTACAGTTGACATTGTCTGGGTTACTGAACTTCATTGATGGGCTATGGTCAAGTTGTGGTGATGAGAGAATAATCATTTTCACCACAAACCACAAGGAAAGGCTAGACCCTGCTTTGGTGCGACCAGGAAGAATGGACATGCACATTCACATGTCCTATTGCTCCTACCACGGCTTCAAGCTTTTGGCATCTAATTACCTGGGAATTTCCTCGGGACATCATTATCTGTTTGGAGAAATAGAAGGCCTAATAGAGGACACACAGATAACCCCTGCTCAAGTGGCAGAGGAGCTGATGAAAAGTGAAGACACTGATGCTGCACTTGAAGGATTCGTTAACCTGCTTAAGAGGAAGAAACTAGAGGGTGATGTGTGTGAGAATGATGCTCCGATCAAACCAAAAAGCAGGAGGAAAGTTGGTAGAATGCAGAAAAAGACTCTGGGGATCAGCACCAGATATGGTACGAGTTCACAAAGAAGGACAAGAAGGGGAAACAAGCTTTA 1484 0.4575 MMFSSRDMPSPSSMFSAYASMTASVMLMRSMANDLIPQPIRGYLANAFRYLIKPHSPNLTLVIEESSGIARNQVYDAAEVYLSTRVSPLNERLKIFKSPKEKRLTIRLEKGEKLVDFYGGAELKWRFICAESENNNPSNNNIAIRSEKQYFELCFHKEHKEMVLDNYLPFILEKSKEMKDEERDLKMHTLNTSYCYSGIKWDSINLEHPSTFETLAMEPELKKAVVEDLDRFVRRKDFYKTVGRAWKRGYLLYGPPGTGKSSLIAAMANHLKFDIYDLQLANIVRDGDLRKLLLATANRSILVIEDIDCSVDLPERTRHADARKQADVQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALVRPGRMDMHIHMSYCSYHGFKLLASNYLGISSGHHYLFGEIEGLIEDTQITPAQVAEELMKSEDTDAALEGFVNLLKRKKLEGDVCENDAPIKPKSRRKVGRMQKKTLGISTRYGTSSQRRTRRGNKL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00781 494 Gene3D - 377 450 - -
Bva08g00781 494 SMART AAA_5 246 382 IPR003593 -
Bva08g00781 494 Pfam Domain associated at C-terminal with AAA 36 128 IPR025753 -
Bva08g00781 494 PANTHER BCS1 AAA-TYPE ATPASE 7 461 - -
Bva08g00781 494 ProSitePatterns AAA-protein family signature. 350 368 IPR003960 GO:0005524|GO:0016887
Bva08g00781 494 Pfam ATPase family associated with various cellular activities (AAA) 251 379 IPR003959 GO:0005524|GO:0016887
Bva08g00781 494 PANTHER BNAA10G17020D PROTEIN 7 461 - -
Bva08g00781 494 CDD AAA 247 380 - -
Bva08g00781 494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 430 IPR027417 -
Bva08g00781 494 Gene3D - 199 376 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00781 Bva-Chr8 4021962 4024426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00781 248 378 Calmodulin-binding Proteins AT3G56690 31.690 6.25e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00781 - - gmx:100789621 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00781 08 4021962 4024426 Bva08g00781 08 4021962 4024426 ECH