Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00780 AtggctttcttttcttcctcttccgcTGAAAACAATCTAGCCACCGCAAAGACTGTGCTCTCGGCAGCGGCCTCCGTCGCCGCCACCGCAATGGTTGTCCGGTCAGTGGCCCAGGACTTCCTACCCGGTGATATTCAGGAATACTTCTTCTCTGGTATCCGGAGCTTTTTGAATCGCTTCTCCTCTCAAATGACCATGGTCATCGACGAGTTCGATGGTCTCGTCAACAACCAAATCTACGAGGCTGCAGAGACTTACTTGGGTAGCAAAGTCACCCCCAATACCCGCAGAATCAAAGTCAGCAAGCCCGACATGGAGAAGAACTTCACTATCACCATGGAAAGCAATGAGGAAATCGTCGACGTCTTCAATGGCGTCAAATTCAATTGGGTCCTCATTTGTCGCCAGGTTGAGTCTCGAAACTTCCATAACCCCCGCGACCTGAATTCAACGCTCCGATCCGAAGTCCGATCATTCGAGCTGACATTCCACAAGAAGCACAAAGACTTGGTTTTGAAATCCTACCTGCCCTTTATCATCAAGGAATCGAAATCGATGAAGCAAGAAACCAAGGCGTTGAGGATTTTCACGGTGGATTATCAGAACATGTATGGGAATCTGAACGACGCGTGGGTTGCCACGAATTTGGACCATCCGTCCACCTTTGAGACACTGGCATTGGACCCTGAAATCAAGAACTTCGTGTTGCAGGATCTGCAGAGGTTCGTGAAGAGGAAAGAATATTACAGGAAAGTTGGGAAGGCATGGAAAAGAGGGTACTTGTTGTACGGCCCACCTGGTACAGGCAAATCAAGCTTGATTGCAGCAATGGCCAATTACCTGCATTTTGACATTTATGATTTGGAGCTAACGGAGCTGCAGTACAACTCGGAGCTCCGAAGGCTACTCATTGGCATGGCCAATAGATCCATTCTTGTTGTGGAGGATATTGATTGCACCATTGAATTCCAGCATCGCATGGCAGAATCAAGAGTAGCCACTGGTTCATCAACTTCAGATAAGCAGGTGACTCTGTCAGGACTGCTGAATTTCATTGACGGGCTGTGGTCAAGTTGTGGAGATGAAAGGATTATAGTGTTCACAACAAACCACAAGGAGAAGCTTGACCCAGCGTTGTTGCGCCCTGGTCGTATGGATGTTCATATTCACATGTCTTATTGTACTCCTTCTATATTTAGGCAACTTGCTTTCAATTACCATGGAATTGAAGACCATTTTCTGTTCAGAGATATTGACGAGGCAATTCAGGCAACTCAGGTAACTCCTGCTGAAGTGGCCGAGCAGCTCTTAAAGAGTAATGACATGGAAACTTCGCTTGGAGACCTCGTTGATTTtctcaaaaggaagaagatagAGAATGAGGAACTCGAAGCTAAGAAGCGTGAAGCAGAGGCCAAAGAGAAGCAAGAGCAGGGCAAGCAGCAAACTGATGGTGATAAAAAATTGGATGATGACGAAAAAGTAGTAGCGGTTGATCCAAATCCAGAGTG 1511 0.4553 MAFFSSSSAENNLATAKTVLSAAASVAATAMVVRSVAQDFLPGDIQEYFFSGIRSFLNRFSSQMTMVIDEFDGLVNNQIYEAAETYLGSKVTPNTRRIKVSKPDMEKNFTITMESNEEIVDVFNGVKFNWVLICRQVESRNFHNPRDLNSTLRSEVRSFELTFHKKHKDLVLKSYLPFIIKESKSMKQETKALRIFTVDYQNMYGNLNDAWVATNLDHPSTFETLALDPEIKNFVLQDLQRFVKRKEYYRKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLHFDIYDLELTELQYNSELRRLLIGMANRSILVVEDIDCTIEFQHRMAESRVATGSSTSDKQVTLSGLLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHIHMSYCTPSIFRQLAFNYHGIEDHFLFRDIDEAIQATQVTPAEVAEQLLKSNDMETSLGDLVDFLKRKKIENEELEAKKREAEAKEKQEQGKQQTDGDKKLDDDEKVVAVDPNPE 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00780 503 Gene3D - 210 389 IPR027417 -
Bva08g00780 503 PANTHER BCS1 AAA-TYPE ATPASE 10 481 - -
Bva08g00780 503 ProSitePatterns AAA-protein family signature. 363 381 IPR003960 GO:0005524|GO:0016887
Bva08g00780 503 PANTHER PROTEIN HYPER-SENSITIVITY-RELATED 4-LIKE 10 481 - -
Bva08g00780 503 MobiDBLite consensus disorder prediction 466 503 - -
Bva08g00780 503 CDD AAA 257 393 - -
Bva08g00780 503 Coils Coil 449 483 - -
Bva08g00780 503 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 439 IPR027417 -
Bva08g00780 503 Pfam ATPase family associated with various cellular activities (AAA) 261 392 IPR003959 GO:0005524|GO:0016887
Bva08g00780 503 Gene3D - 390 462 - -
Bva08g00780 503 Pfam Domain associated at C-terminal with AAA 41 133 IPR025753 -
Bva08g00780 503 SMART AAA_5 256 395 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00780 Bva-Chr8 4016605 4018994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00780 235 391 Calmodulin-binding Proteins AT3G56690 28.485 5.96e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00780 - K08900 qsu:112035142 676.781