Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00778 ATGGTGCAAGAGGTTGGAGAAGAAGGGGCAGTTGGCTGGTCCACTTGGTTGGAGAAAGAGGAGGAAGCTAGACGACGGGTTACGGAAGAGGAAACCTTACATGAAGATAAAGGTGGCTGGACTGGTTGGTCGGAACCATTGTCCAAAGATAAGGAGGGTTTccatgatgaaaatgaaaccaaaaatgATGTGGTTATGGAAGATTttcaagaggaagaagaatataaagatACTGAGCAGGAAGATATGTATCTCCCTCCCCCCgccctctctttctttcatGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGCGTTccagagagagagatgggTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGCAGTGCTGCTGGAGCAACTACTTCACTTCTTCTGTATCATTTAGATTATGCACGTACACGATTGGGCACTGATTCAGGGGTGAGCCATGCTAATGGTCAGCGCCAGTTTAAAGGGCTAGTTGATGTGTACCGTAAAACCTTATCAAGTGATGGAGTTGTTGGTCTGTACAGGGGATTCGGGGTTTCAATAATGGGAATCACCATGTACCGAGGCATGCACTTTGGGATCCATGACACCATGAAGCCCATTGTTTTAGTTGGCCCTTTTGAGggaaatttttttgctaGTTTCTTTTTAGGTTGGAGTATCACAACCTTTGCTGGGTTTTGCGCCTACCCGTTTGACACGCTGAGACGAAGAATGATGCTAACATCTGGGCAGCCAATAAAGTATCGCAATGCAATGCATGCATTCAATGAGATCGTTAGGCATGAGGGCTTCCTTGCTCTATTTCGAGGAGTTACTGCAAATATGCTTCTTGGTGTAGGAGGGGCTGGGGTGCTTGCAGGATTTTATCAGCTGCACAGAATCTCATCTAGACATGGTTACCATTATGATACCCAGAGAGTTTTAAAAGTAGTAGGGGATTTGTA 977 0.4084 MVQEVGEEGAVGWSTWLEKEEEARRRVTEEETLHEDKGGWTGWSEPLSKDKEGFHDENETKNDVVMEDFQEEEEYKDTEQEDMYLPPPALSFFHAFNFAFKGYFKSIFGRSRERDGYIKWFAGNVASGSAAGATTSLLLYHLDYARTRLGTDSGVSHANGQRQFKGLVDVYRKTLSSDGVVGLYRGFGVSIMGITMYRGMHFGIHDTMKPIVLVGPFEGNFFASFFLGWSITTFAGFCAYPFDTLRRRMMLTSGQPIKYRNAMHAFNEIVRHEGFLALFRGVTANMLLGVGGAGVLAGFYQLHRISSRHGYHYDTQRVLKVVGDL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00778 325 PRINTS Adenine nucleotide translocator signature 119 132 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva08g00778 325 PRINTS Adenine nucleotide translocator signature 224 240 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva08g00778 325 PRINTS Adenine nucleotide translocator signature 93 105 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva08g00778 325 Coils Coil 17 37 - -
Bva08g00778 325 Pfam Mitochondrial carrier protein 120 211 IPR018108 -
Bva08g00778 325 Pfam Mitochondrial carrier protein 220 301 IPR018108 -
Bva08g00778 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 306 IPR018108 -
Bva08g00778 325 MobiDBLite consensus disorder prediction 1 77 - -
Bva08g00778 325 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 94 317 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva08g00778 325 MobiDBLite consensus disorder prediction 48 65 - -
Bva08g00778 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 211 IPR018108 -
Bva08g00778 325 PRINTS Mitochondrial carrier protein signature 134 152 IPR002067 GO:0055085
Bva08g00778 325 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Bva08g00778 325 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Bva08g00778 325 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 94 317 - -
Bva08g00778 325 MobiDBLite consensus disorder prediction 14 38 - -
Bva08g00778 325 Gene3D Mitochondrial carrier domain 89 311 IPR023395 -
Bva08g00778 325 SUPERFAMILY Mitochondrial carrier 91 300 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00778 Bva-Chr8 4006278 4008492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00778 94 309 Antiporters AT5G17400 76.389 4.23e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00778 K05863 - mnt:21399720 357.451