Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00753 ATGAATGATCTAATGACGAATTCGTTCTTAAGTTATATTGAACTGAAGAAACAGGCGCAGAAGGACCTTGAAGCCGGTCTTGACATTGAAGCAGGGAAACTCAACCCCATAGTAGACCAGAACCTCTCTCTGTTCTTCCACGAAGTTGACGCAATCAAGTCTGAAATGGCAGAGATTACCAATCTCTTATTTGATCTTCGACACCTCAATGAAGAGACAAAATCTATCCATAGTGCCAAAGTTCTTCGCGGGCTAAGAGACCGAATGGAATCAGACATGGTTGCCGTACTTCGCAAAGCAAAGATTATTAAGGCAAGGCTACAAGCGCTCGACCAATCCAACATAAATAACCGCACAATATCAGAAGCCTACAAAGAAGGAACTCCAATTGATAGAACAAGGATTTCAGTCACAAATGGTTTGAGGGTCAAGCTTAGGGATATGATGAATGATTTTCAGTCCTTGAGAGACAAGGCTCTGTCTGATCATAAGGAGGATCTCAAGAGGAGGTACTATTCTGCGATAGGGGAGGTCCCAAGCGAGGAGATGATGGAGAAGATGATTTCAGGGAGTCTTAAAATTGAGTCAATTGCTGGGAAAGCAGAGGCTGATATGGATACCCAGTTAAGGAACGAAGCTGTGAGGAATCTACAGAGAAGTTTGAACAAGCTTCAGCAGGTTTTCCTTGACATGGCTGTTCTGGTTGAGACACAAGGCGAAAAGATAGATGACATTGAAGAGAATGTAACCAATGCTAGTGACTTCATTCATGGTGGAACTAATAGTCTTTACTATGCGAAGCAGATGAAGAAAAGGAACAGAAAATGGGTCTTCTGGGTTGTGGCTTTGGTGCTGATTGTACTATTGGTGTGCTTCATTGCAACATTCACTTCTTG 896 0.4263 MNDLMTNSFLSYIELKKQAQKDLEAGLDIEAGKLNPIVDQNLSLFFHEVDAIKSEMAEITNLLFDLRHLNEETKSIHSAKVLRGLRDRMESDMVAVLRKAKIIKARLQALDQSNINNRTISEAYKEGTPIDRTRISVTNGLRVKLRDMMNDFQSLRDKALSDHKEDLKRRYYSAIGEVPSEEMMEKMISGSLKIESIAGKAEADMDTQLRNEAVRNLQRSLNKLQQVFLDMAVLVETQGEKIDDIEENVTNASDFIHGGTNSLYYAKQMKKRNRKWVFWVVALVLIVLLVCFIATFTS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00753 298 Gene3D - 38 170 - -
Bva08g00753 298 SMART tSNARE_6 199 266 IPR000727 -
Bva08g00753 298 Pfam SNARE domain 240 290 IPR000727 -
Bva08g00753 298 PANTHER SYNTAXIN-112 3 294 - -
Bva08g00753 298 CDD SNARE_syntaxin1-like 206 263 - -
Bva08g00753 298 Pfam Syntaxin 45 239 IPR006011 GO:0016020
Bva08g00753 298 CDD SynN 45 194 IPR006011 GO:0016020
Bva08g00753 298 Gene3D - 198 297 - -
Bva08g00753 298 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 266 IPR000727 -
Bva08g00753 298 SUPERFAMILY t-snare proteins 40 259 IPR010989 GO:0016020|GO:0016192
Bva08g00753 298 SMART SynN_4 37 164 IPR006011 GO:0016020
Bva08g00753 298 PANTHER SYNTAXIN 3 294 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00753 Bva-Chr8 3904742 3906600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00753 1 298 SNARE and Associated Proteins AT2G18260 55.375 2.09e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00753 K08486 - gmx:112997615 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00753 08 3904742 3906600 Bva08g00753 08 3904742 3906600 ECH