Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00746 ATGGCTTCATCTTGGACACCAAGGCAAAACAAACTATTTGAAAAGGCCCTAGCCTTATACGATAAGGAAACCCCTGATAGATGGCAGAATGTTGCCAAAGTGGTGGGAAAATCTGTAGAGGAGGTTAGAAGGCACTATGAGATCCTCGAGGAAGACGTGGAACGCATTGAGCATGGTCAAGTCCCATTACCCCGTTACAGAACAAACAGCAACAACACCTA 221 0.457 MASSWTPRQNKLFEKALALYDKETPDRWQNVAKVVGKSVEEVRRHYEILEEDVERIEHGQVPLPRYRTNSNNT 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00746 73 Coils Coil 39 59 - -
Bva08g00746 73 SMART sant 1 52 IPR001005 -
Bva08g00746 73 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 72 - -
Bva08g00746 73 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Bva08g00746 73 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 72 IPR044636 GO:0003700
Bva08g00746 73 Gene3D - 2 63 - -
Bva08g00746 73 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Bva08g00746 73 CDD SANT 4 46 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00746 Bva-Chr8 3869768 3869989 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva08g00746 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00746 - - lja:Lj4g3v0973380.1 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00746 08 3869768 3869989 Bva08g00746 08 3869768 3869989 ECH
Bva13g00191 13 924763 926451 Bva08g00746 08 3869768 3869989 ECH
Bva14g00262 14 1351855 1352866 Bva08g00746 08 3869768 3869989 ECH