Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00739 ATGATGCATCGTTACAGTAGCTCTCAGGGGCACGTGATGGGACCTTGTCCGTGCGGTTTGTTTCACAGCCAAACAAGTTCCTACTCCATGCTATTCTCAATGCCCAACCATAAACCCTATGATCAGTATGACGAATCCGACATGTATTCCTCCACGCCCTCCTCGTCTTCCGTGGACTGCACGCTCTCTCTAGGCACCCCGTCCACGCGTTTCAccgaagatgaagaaaagcgTAACCGCCATGAACGTCGCAATTCCGTCTCCAACTTCTGCTGGGATTTATTACAATCCAAACACAATCCACAATCCCACAGCAAGTCCAACCGAGGAGCCACCCATGGCAGCAACTCCACCAATGATCCTCTCCTCGCTCGTCGCTGCGCCAACTGTGACACCACCTCCACACCCCTTTGGAGAAATGGCCCTAGAGGACCAAAGTCACTGTGCAATGCGTGTGGGATTAGATtcaagaaggaagagagaagagcGAGCGTTGCGGCCGCCACCACTGGAACCCCTTCTGGCGGTGTAATGGATTCGCAGCAGATGTACAACAATTCATGGTACCCACACTCGCAGAACCAGAAAATGCCGTGCTACTCGCCGGCAATGGGCAATGAGTTTCGCTTCGTCGACGACAGCGATCGAGACTCAGACAACGGTATTCCATTCCTCTCTTGGAGACTCAATGTCACAGACAGACCGAGCCTCGTCCATGACTTTACGAGATG 731 0.5007 MMHRYSSSQGHVMGPCPCGLFHSQTSSYSMLFSMPNHKPYDQYDESDMYSSTPSSSSVDCTLSLGTPSTRFTEDEEKRNRHERRNSVSNFCWDLLQSKHNPQSHSKSNRGATHGSNSTNDPLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASVAAATTGTPSGGVMDSQQMYNNSWYPHSQNQKMPCYSPAMGNEFRFVDDSDRDSDNGIPFLSWRLNVTDRPSLVHDFTR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00739 243 MobiDBLite consensus disorder prediction 45 69 - -
Bva08g00739 243 Gene3D - 123 196 IPR013088 GO:0006355|GO:0008270
Bva08g00739 243 SMART GATA_3 121 173 IPR000679 GO:0006355|GO:0043565
Bva08g00739 243 Pfam GATA zinc finger 127 161 IPR000679 GO:0006355|GO:0043565
Bva08g00739 243 CDD ZnF_GATA 126 158 IPR000679 GO:0006355|GO:0043565
Bva08g00739 243 ProSiteProfiles GATA-type zinc finger domain profile. 121 157 IPR000679 GO:0006355|GO:0043565
Bva08g00739 243 MobiDBLite consensus disorder prediction 44 83 - -
Bva08g00739 243 ProSitePatterns GATA-type zinc finger domain. 127 152 IPR000679 GO:0006355|GO:0043565
Bva08g00739 243 PANTHER GATA TRANSCRIPTION FACTOR 18 1 242 IPR044272 GO:0003700|GO:0009908
Bva08g00739 243 PANTHER GATA TRANSCRIPTION FACTOR 18 1 242 - -
Bva08g00739 243 MobiDBLite consensus disorder prediction 99 120 - -
Bva08g00739 243 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 124 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00739 Bva-Chr8 3835046 3835885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00739 18 243 C2C2-Gata Transcription Factor Family AT3G50870 45.965 2.59e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva08g00739 GATA 5.8e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00739 - - gmx:100790571 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00739 08 3835046 3835885 Bva08g00739 08 3835046 3835885 ECH