Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00709 ATGAGAGTTCCCGTTTCGTCCCCACAGAACAACCATTCCAGCAATCCAAAACCCAATAACACAGCTCGTCCTCCTTCCAACGTGAACCCCAGCTTGTGCTACGAACCCACTTCGGTTCTCGACTTGTGCCGCAGTCCTAGCCCCGGGTCAGTCCCGGAGAAGCCTGCGGACCACTCAGCTGCGACGGACTCGCTGTCAAAGCCAGAAGAATCTCTGGAGCTGGACGAACATGTGTTGCATAATCTGGACTGGGATTCCATCATGAAGGACTTGGGTTTGCACGATGACTCCGGCGCAGCCGTTTTGAGGAGTATTTCTAATCCCAATCCATGTGAATCTCAAGTTCCTCACCTGCCTGAGCTTGTAGGTTCTCAGGAGCCGTCGTTTGATCATGCTTCAGAATATTTCGGTCTCTCAGAGGTTTACCTGAATCAAAATCCGGGTTTCTATAGCACTAGTACTTTTGATAATTTGGTTCAAGAGTTCAATCACAACAGCAATTGGAACGGCGCCTTTGATTTCATCAAGGAGCTCACTCGGGCCGCTGATTGCTTTGACACCAACCAACTACAAATCGCTCAGGTGCTATTGGAGCGGCTCAATCAACGACTACGATCACCGCTCGGAAAACCCCTACAGAGAGCGgctttttatttcaaagagGCTCTTCAATCCCTTCTTTCCGGTTCGAACCGGACTCCGCGTCTTTCTTCCTTGATGGAAATTGTGCAAACTATCAAGACCTTCGAGGCTTTCTCTGGTATCTCGCCTATTCCCATGTTCTCCATTTTCACCACCAATCAAGCACTCCTCGAAGCCCTTCATGGTTCATCTTTTATGCACGTTGTGGACTTCGACATCGGTCTCGGTATCCAATACGCCTCTCTCATGAAAGAGATTGCTGAGAAGGCTGAGTCATGTAAACTCAACTCGCCGTTGCTTCGAATCAGCGCCGTCGTTCCCGAAGAATTCGCTGTGGAAAGCAGATTGATCAGAGAAAACTTGAACCAGTTTGCCCATGAACTCAGAATCAGGGTGCAGGTGGACTTTGTCCTGATGCGGACCTTCGAAACGTTGTCGTTTAAGGCCATCAAGTTCATTGAAGGCGAGAAGACCGCTGTTCTCATATCTCCCACGATCTTTCGCCGCCTTGGTTCGACCAGCAACATGGCTGCATTTCTGGGGGATGTTCGGAGGGTTTCGCCCAGTGTGGTCATTTTTGTTGACAACGAAGGTTGGATGGAAGCGGCAGCAGCGACGTCGTTTCGTCGGGGTGTGGTTAACAGCCTGGAATTCTACTCCATGATGTTGGAGTCTTTGGATGCGTCTATAGTTGGTGGTGGCGGGGATTGGATACGGAAAATTGAGATGTTTCTGCTGCGTCCGAAGATTATGGCGGCGGTGGAAGGCGCTGGACGGCGAGTGTCTCCATGGAGGGAAGCGTTTTATAGCGCGGGAATGAGGCCCGTCCAGTTAAGCCAGTTCGCGGATTTTCAAGCCGAGTGTTTATTGGCTAAGGTGCAAATTAGGGGTTTCCAGGTAGCAAAACGACAGGCTGAGCTGGTGCTCTTCTGGCATGAGCGAGCCATGGTTGCCACGTCAGCTTGGCGTTGTTA 1616 0.5031 MRVPVSSPQNNHSSNPKPNNTARPPSNVNPSLCYEPTSVLDLCRSPSPGSVPEKPADHSAATDSLSKPEESLELDEHVLHNLDWDSIMKDLGLHDDSGAAVLRSISNPNPCESQVPHLPELVGSQEPSFDHASEYFGLSEVYLNQNPGFYSTSTFDNLVQEFNHNSNWNGAFDFIKELTRAADCFDTNQLQIAQVLLERLNQRLRSPLGKPLQRAAFYFKEALQSLLSGSNRTPRLSSLMEIVQTIKTFEAFSGISPIPMFSIFTTNQALLEALHGSSFMHVVDFDIGLGIQYASLMKEIAEKAESCKLNSPLLRISAVVPEEFAVESRLIRENLNQFAHELRIRVQVDFVLMRTFETLSFKAIKFIEGEKTAVLISPTIFRRLGSTSNMAAFLGDVRRVSPSVVIFVDNEGWMEAAAATSFRRGVVNSLEFYSMMLESLDASIVGGGGDWIRKIEMFLLRPKIMAAVEGAGRRVSPWREAFYSAGMRPVQLSQFADFQAECLLAKVQIRGFQVAKRQAELVLFWHERAMVATSAWRC 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00709 538 ProSiteProfiles GRAS family profile. 165 537 IPR005202 -
Bva08g00709 538 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 537 IPR005202 -
Bva08g00709 538 MobiDBLite consensus disorder prediction 1 71 - -
Bva08g00709 538 Pfam GRAS domain family 175 537 IPR005202 -
Bva08g00709 538 MobiDBLite consensus disorder prediction 1 34 - -
Bva08g00709 538 PANTHER SCARECROW-LIKE PROTEIN 15 5 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00709 Bva-Chr8 3663521 3665769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00709 72 537 GRAS Transcription Factor Family AT4G36710 56.846 1.58e-172 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva08g00709 GRAS 4.3e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00709 - - cam:101510420 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00709 08 3663521 3665769 Bva11g01630 11 14981231 14983215 BWGD
Bva08g00709 08 3663521 3665769 Bva08g00709 08 3663521 3665769 ECH