Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00707 ATGAAACCAGGTGATCTGAGGACTTTCGCCTGGGAAGAGAGCGCAGCTAAATCTTCTAAGACATCTTCTTCAGCCCAGGAGATACCAGCAGCACCTTCATATACCGATTGGTCAAACTCTATGCAGGCTTATTATGGTCCTGGAGCCACTCCACCTTTTTTTGCCTCGACTGTTGCTTCGCCTACTCCCCACCCTTATTTATGGGGGAGCCAGcatCCTCTAATTCCACCATATGGGACTCCAGTTCCTTATCCAGCTATATATCCTCCAGGGAGTGTTTATGCTCATCCAAGCATGGCCACGACTCAAAACGCTGTACCACCAAATACAGAGTTGGATGACAAGCCACCTGATGGAAAAGATCGCGCTTCAGCCAAAAAATCAAAGGGAACTCCTGCTAATGCAGGTTCCAAAGCAGGAGAGAGTGGAAAGGCGGACTCAGGGTCAGGAAATGATGGCAACTCACAAAGTGCTGAAAGTGGTTCAGAGGGATCATCAGACGCTAGTGATGAGAATACTAACCAACAGGAATCAGctgcaaacaaaaaaggaagctTTAACCAGATGCTTGTCGATGGAGCCAACGCACAAAACCATTCTGTGCCTGGAAAAGCAGTTGTCTCAATGCCTGCGACTAATCTGAATATCGGAATGGACTTATGGAACGCAACCCCAGCTGGCGCTGAAGCAgtaaaaatgagacaaaatcaATCTGGCGCCTCTGCAGCTGCTCCATCAATGGTAATGGGACGTGAAGTTGCACTTAGTGAACAGTGGATACAAGATGAACGTGAATTGAAAAGACAGAAGAGGAAGCAGTCTAATAGAGAGTCAGCTAGGAGGTCAAGACTGCGCAAGCAGGCTGAGTGTGAAGAGTTGCAAAAGAGGGTGGAGACATTGGGGAGCGATAACCGAACTCTGAGAGACGAGCTACAGAGGCTTTCTGAAGAATGCGAAAAGTTGACATCTGAAAATAGTTCTATCAAGGAAGAGTTGGAACGGTTGGGTGGACCAGATGCAGTTTCTAACCTTGAATA 1037 0.4581 MKPGDLRTFAWEESAAKSSKTSSSAQEIPAAPSYTDWSNSMQAYYGPGATPPFFASTVASPTPHPYLWGSQHPLIPPYGTPVPYPAIYPPGSVYAHPSMATTQNAVPPNTELDDKPPDGKDRASAKKSKGTPANAGSKAGESGKADSGSGNDGNSQSAESGSEGSSDASDENTNQQESAANKKGSFNQMLVDGANAQNHSVPGKAVVSMPATNLNIGMDLWNATPAGAEAVKMRQNQSGASAAAPSMVMGREVALSEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVETLGSDNRTLRDELQRLSEECEKLTSENSSIKEELERLGGPDAVSNLE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00707 345 MobiDBLite consensus disorder prediction 113 127 - -
Bva08g00707 345 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 265 328 IPR004827 GO:0003700|GO:0006355
Bva08g00707 345 MobiDBLite consensus disorder prediction 147 187 - -
Bva08g00707 345 SUPERFAMILY Leucine zipper domain 266 322 IPR046347 GO:0003700|GO:0006355
Bva08g00707 345 Coils Coil 276 331 - -
Bva08g00707 345 SMART brlzneu 263 327 IPR004827 GO:0003700|GO:0006355
Bva08g00707 345 MobiDBLite consensus disorder prediction 98 187 - -
Bva08g00707 345 CDD bZIP_plant_GBF1 268 318 IPR045314 GO:0003700|GO:0006355
Bva08g00707 345 Pfam bZIP transcription factor 263 325 IPR004827 GO:0003700|GO:0006355
Bva08g00707 345 MobiDBLite consensus disorder prediction 1 33 - -
Bva08g00707 345 Gene3D - 266 321 - -
Bva08g00707 345 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 270 285 IPR004827 GO:0003700|GO:0006355
Bva08g00707 345 MobiDBLite consensus disorder prediction 318 336 - -
Bva08g00707 345 PANTHER G-BOX-BINDING FACTOR 3-RELATED 12 345 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bva08g00707 345 MobiDBLite consensus disorder prediction 318 345 - -
Bva08g00707 345 Pfam G-box binding protein MFMR 14 99 IPR012900 -
Bva08g00707 345 MobiDBLite consensus disorder prediction 14 33 - -
Bva08g00707 345 MobiDBLite consensus disorder prediction 266 288 - -
Bva08g00707 345 PANTHER G-BOX-BINDING FACTOR 1 12 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00707 Bva-Chr8 3653434 3657783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00707 17 345 bZIP Transcription Factor Family AT4G36730 55.952 6.59e-108 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva08g00707 MFMR 2.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00707 K09060 - gmx:778124 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00707 08 3653434 3657783 Bva08g00707 08 3653434 3657783 ECH