Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00687 ATGGCCATGCGTTTCTTTCCCCTCATCCCTATCTTCACTCTTGCCATATTCTGTTGCTTCTCTCTGATTCTGGGGCAGCAGCCTTATATTGGAAAGGGCACAACTGCATGTCCCAGAAGGGGTAACTCAAATTCTATTCGTGGTTACACTTGCAACGGTGTCAGTCGTAGTTGCCAAGCTTACCTTACCTTCAGATCTCAACCCATTTACAATTCTGTTTCCACAATCTCAGCTTTGTTGGGTGCTGACCCATCTCAGCTTTCCGAGATAAACGAGGTTACTCGTAATGCAACCTTTGAAACGAATAGGTTGGTGATTGTTCCAGTGAACTGCTCCTGTGCTGGTGGGTATTATCAAGCAAACACATCCTATGTAGTACAGAACGCAGATACCTTGTTTTTGATTGCTAACAACACTTTTGAAGGCCTCTCAACCTGTCAAGCTCTAGAGAATCAAAACGAATTGCCCAGGAGAGATTTGCCCCCTGGTACAATACTTGTTGTTCCTCTTAGATGTGCTTGTCCCACAAAAAATCAAACTGAGAAAGGTGTCAAGTACCTTTTGAGTTATTTAGTAACTTGGGGAAATTCTGTTTCCCGTATTAGTAAAAGATTTGGTGTGGATACTAATACCACTCTTGAAGCTAATAGCCTTTCTTATGCAAGCTCCACCATTTATCCATTTACCACAATTTTAGTCCCCCTTCAAGATCCACCCTCCAGCTCTCAAACACTTCAGCCACCTCCATCACCTTCGCCCCCATCACCTCCCACCTCTTCCTCAGATGGAAACTCCAACAAAACGTGGGTCTATGTTGTTGTTGGAGGAAGTGCTTTAATATTAGCACTCGGTGCCATCATTTTCTGCAGAGTCTACCGCAaaggtaaaaagaaatatgatccTGCTATTGTCTCTCAGAGTCAGAGTCACAGTTTTGAGGCAACTGAAAAACCAGAGGGGAAGATCTTGTTGGAGGGAGAATCTGAAGAATTGTCCGAGATGATATCCAGTATAGGTAAATCGTTTAAAGTGTACAGTTTTAAGGAACTACAGCGAGCAACAGAGGATTTTAGTCAAAGCTTCTGGATCAAAGGATCTGTTTATCGGGGTGTTATTAGTGGTGATTTGGCTGCAATTAAGAAGATGGAAGGTGATGTGTCAAAAGAGATAAAACTGCTGAACAAAATCAACCATTGTAATGTGATACGCCTTTCTGGGGTTAATTTTAACGAAGGCCATTGGTACCTTGTTTATGAATATGCGGCCAATGGGTCCTTGAGTGATTGGATCTACTCGAACGCCATTGATGACAAGTTTCTGAATTGGATACTGAGAATGCAGATTGCGTTGGATGTAGCCACTGGGCTTGACTATCTCCATAGTTTCACTTCTCCTCCCTATATCCACAAGGATTTAAAGGGCAGTAACATTCTTCTGGACAGTTGCTTCAGGGCAAAGATTGCAAATTTTGGCCTTGCGAGGTCTGTTGAAGGAGAGGAAGATCAATTTCCCATGACAAGGCATATTGTTGGGACAAAAGGTTACATGGCTCCTGAGTATTTGGAAAATGGTGTTGTATCTACGAAGCTAGATGTCTACGCATTTGGGGTTCTGATTCTGGAAATGCTCACTGGAAAAGAGGTTGCTGCTTTTTATACAGAAGATAAGGTGAATTTGTCTGATGCTTTAAGGGCCATTCTCGGCGAGGAAAGCGATCAGGAGAGGTTGAGGGGTTTTATGGATCCATCTCTGCATGGAAGTTATCCACTGGAACTTGCCAACTTTGTGCTAAGACTGGTCCTTAATTGCATTGACAAAGATCCAGAAAATCGCCCCGCCATGCATGAAATTGTAACATCCCTATCGAGAACCTTAGACTCATCATTGACCTGGGAAACCTCGATGAACATCTCAGTATGCCAGAGTTTCAGCAGAAGCTCTTG 1943 0.4282 MAMRFFPLIPIFTLAIFCCFSLILGQQPYIGKGTTACPRRGNSNSIRGYTCNGVSRSCQAYLTFRSQPIYNSVSTISALLGADPSQLSEINEVTRNATFETNRLVIVPVNCSCAGGYYQANTSYVVQNADTLFLIANNTFEGLSTCQALENQNELPRRDLPPGTILVVPLRCACPTKNQTEKGVKYLLSYLVTWGNSVSRISKRFGVDTNTTLEANSLSYASSTIYPFTTILVPLQDPPSSSQTLQPPPSPSPPSPPTSSSDGNSNKTWVYVVVGGSALILALGAIIFCRVYRKGKKKYDPAIVSQSQSHSFEATEKPEGKILLEGESEELSEMISSIGKSFKVYSFKELQRATEDFSQSFWIKGSVYRGVISGDLAAIKKMEGDVSKEIKLLNKINHCNVIRLSGVNFNEGHWYLVYEYAANGSLSDWIYSNAIDDKFLNWILRMQIALDVATGLDYLHSFTSPPYIHKDLKGSNILLDSCFRAKIANFGLARSVEGEEDQFPMTRHIVGTKGYMAPEYLENGVVSTKLDVYAFGVLILEMLTGKEVAAFYTEDKVNLSDALRAILGEESDQERLRGFMDPSLHGSYPLELANFVLRLVLNCIDKDPENRPAMHEIVTSLSRTLDSSLTWETSMNISVCQSFSRSS 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00687 647 Gene3D Phosphorylase Kinase; domain 1 328 420 - -
Bva08g00687 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Bva08g00687 647 ProSiteProfiles Protein kinase domain profile. 277 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00687 647 Gene3D LysM domain 189 236 IPR036779 -
Bva08g00687 647 SUPERFAMILY Protein kinase-like (PK-like) 339 621 IPR011009 -
Bva08g00687 647 SMART serkin_6 336 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00687 647 Pfam LysM domain 124 169 IPR018392 -
Bva08g00687 647 Pfam LysM domain 190 234 IPR018392 -
Bva08g00687 647 Pfam Protein kinase domain 379 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00687 647 ProSiteProfiles LysM domain profile. 188 233 IPR018392 -
Bva08g00687 647 MobiDBLite consensus disorder prediction 241 258 - -
Bva08g00687 647 ProSiteProfiles LysM domain profile. 122 168 IPR018392 -
Bva08g00687 647 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 3 636 - -
Bva08g00687 647 Gene3D LysM domain 118 182 IPR036779 -
Bva08g00687 647 Gene3D Transferase(Phosphotransferase) domain 1 422 640 - -
Bva08g00687 647 MobiDBLite consensus disorder prediction 237 263 - -
Bva08g00687 647 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 3 636 - -
Bva08g00687 647 SMART LysM_2 189 234 IPR018392 -
Bva08g00687 647 SMART LysM_2 123 169 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00687 Bva-Chr8 3558539 3560528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00687 12 634 Receptor kinase-like Gene Family AT2G23770 46.009 5.29e-180 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva08g00687 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00687 - - gmx:100815842 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00687 08 3558539 3560528 Bva08g00687 08 3558539 3560528 ECH