Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00686 ATGGCAGTCTCCTTCCTTCTGTTTTTTGCACTGATGCTTTTTTCCATCTCCCATATCTCAGGAACAAACTTTACATGCCCTGCAGATGCAGCTTCAGTTTTTCCCTGTGACACTTACGTGGCATACTTTGCCCAATCTCCAAATCTGTTGAGTCTGACAAGCATATCTGATATATTTGGCATCAGTCCTTTATCGATTGCAAGACCAAGTAATTTAACAGAAGACGATGGCATGCAGCTGATTCCCGGCCAACTCTTATTGGTGCCTGTCGAATGTGGTTGCACTGGGAACCGCTCTTTTGCGAATGTTACCTACGAGATGAAGTCAGGTGACagttatttctttgtttcatctACTTTACTCGAGAACCTCACCAATTGGCATGCAGTGAAAGAATTCAACCCCTATCTAAATCCAAATCTCTTGCCAATAGGCACCAAAGTAGTCTTCCCTTTGTCCTGCAGCTGCCCTTCAAAAGAGCAGTCAGCCAAAGGGATTACAAATCTGATTACATATGTGTGGCAACCCACTGATAATGTTTCCCTCGTTAGTGCAAAGTTTAATGCATCGGCAACGGACGTAATGGCTGAAAACAATTCCCAGAACTTCACCAGTGCAGTTAACCTGCCAGTTTTGATCCCAGTGACAAGGTTGCCAGTTCTCTCACTGCCTCATTCTtctcataaaagaaaacaaaacagtcCTCTAGTGGTTATTATTGGTGTCAGCCTCGGATGCACTCTTCTGATTGCTGTTTTAGCAACGTCACTGGTTTATCTTTACTGtctgagaaaggaaaagatgaGTTTGGATCGTTGTGATTCATCTTTGGAGCAGGCTAACAAGCTATTAACTGGCGTTTCAGGCTATGTAAGTAAGCCAGCCATATTTAACATTGATATGATTATGGAAAGTACTATGAACCTCAGTGAACAACGTAGGATTGGGGGATCAGTGTACAGGGCCAAAATTGATGGCCAGATTTTAGCAGTGAAAAAGACCAAAGAAGATGTCACGGAGGAGCTAAAAATTCTACAGAAGGTAAATCATGCAAATCTGGTGAAGTTAATGGGAGTCTCATCAGACAATGAAGGAAATTGCTTCCTAGTTTATGAATATGCTGAAAATGGGTCTCTTGATAACGTGCTGTTCTCCAAGTCTCCAGCCACTTCAAACTTACTCACATGGAACCAAAGGATATGCATAGCACTTGATGTGGCCATGGGTCTGCAATACCTGCATGAACACATTGAACCAAGAATAGTCCATAGGGACCTCAGCACCAGTAATATCCTTCTTGACTCTAAGTTGAAGGCCaagatttcaaatttctcTATGGCGAGGACTTCCACAAATACTATGACGCCGAAAATAGatgtttttgcttttgggCTTGTTCTGTTCGAGTTGCTTACGGGCCAGAAATCCATGAGAACCAATGAAAGTGGTGAGGTTGTTCTGCTGTGGAAGGATATGAGGGGAATCTTTGATGAACAAGAGAATAGAGAGGAGAGGCTCAAAGGATGGATGGATCCTAAGCTGGAGAGTTTTTATCCAGTTGATGATGCTCTGAACTTGGCCAATTTGGCAATGACTTGCACGGCGGAGATGACTTCGTCCAGACCAACCATGGCAGAAGTTGTTCTTAGTCGCTCCCTTCTCACTCAACCAGCTCCTGCAACGTTAGAGAGATCCCTCACTTCTGAGACAGATGCAGAACTTTCTCAAATGGTTGCTCCTCGTTG 1745 0.4166 MAVSFLLFFALMLFSISHISGTNFTCPADAASVFPCDTYVAYFAQSPNLLSLTSISDIFGISPLSIARPSNLTEDDGMQLIPGQLLLVPVECGCTGNRSFANVTYEMKSGDSYFFVSSTLLENLTNWHAVKEFNPYLNPNLLPIGTKVVFPLSCSCPSKEQSAKGITNLITYVWQPTDNVSLVSAKFNASATDVMAENNSQNFTSAVNLPVLIPVTRLPVLSLPHSSHKRKQNSPLVVIIGVSLGCTLLIAVLATSLVYLYCLRKEKMSLDRCDSSLEQANKLLTGVSGYVSKPAIFNIDMIMESTMNLSEQRRIGGSVYRAKIDGQILAVKKTKEDVTEELKILQKVNHANLVKLMGVSSDNEGNCFLVYEYAENGSLDNVLFSKSPATSNLLTWNQRICIALDVAMGLQYLHEHIEPRIVHRDLSTSNILLDSKLKAKISNFSMARTSTNTMTPKIDVFAFGLVLFELLTGQKSMRTNESGEVVLLWKDMRGIFDEQENREERLKGWMDPKLESFYPVDDALNLANLAMTCTAEMTSSRPTMAEVVLSRSLLTQPAPATLERSLTSETDAELSQMVAPR 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00686 581 Gene3D Transferase(Phosphotransferase) domain 1 453 564 - -
Bva08g00686 581 ProSitePatterns Tyrosine protein kinases specific active-site signature. 421 433 IPR008266 GO:0004672|GO:0006468
Bva08g00686 581 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 6 577 - -
Bva08g00686 581 Pfam Protein tyrosine and serine/threonine kinase 332 452 IPR001245 GO:0004672|GO:0006468
Bva08g00686 581 Gene3D Transferase(Phosphotransferase) domain 1 298 452 - -
Bva08g00686 581 ProSiteProfiles Protein kinase domain profile. 277 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00686 581 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 577 - -
Bva08g00686 581 SUPERFAMILY Protein kinase-like (PK-like) 296 549 IPR011009 -
Bva08g00686 581 MobiDBLite consensus disorder prediction 562 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00686 Bva-Chr8 3556014 3557759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00686 70 554 Receptor kinase-like Gene Family AT3G21630 30.297 2.36e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva08g00686 PK_Tyr_Ser-Thr 6.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00686 - - gmx:100301877 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00686 08 3556014 3557759 Bva08g00686 08 3556014 3557759 ECH