Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00685 atgcgatatctgaaaaaaatgGAGCCACGCCTCGTTACCAGAAACACAAAATCGCCAAATCGCATAGGCAAGAGATACAATCGGAATTTTAAACTTGTAGGGTTTAGCAATAATATGGACCAGGCGGAATTAAGCACTGAACAGGTGCTGAGGAGGGATATCCCATGGGAGACGTACATGGCCACTAAGCTGATCTCAGGCACAAGCCTTCAGCTCTTAAGGCGTTATGATCATAGATCAGAAAGTCACAGAGCACAGTTGCTGGATgatGATGGTCCAGCTTATGTACGCGTATTTGTTTGTGTCCTGCGTGACATTTTTAAAGAAGAGACCGTAGAATATGTTCTGGCATTGATAGATGAAATGCTTACAGCAAATCCCAAGAGAGCAAGACTGTTTCATGACAGGTCACTTGCTGATGAAGATACTTATGAACCTTTCTTAAATTCTAGGTTGCTTTGGAAAGGAAATTGGTTTATACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATAGTTAGTGCCAGGCCAAGAAATCAGAATGGCATTGTTCCTAATGGAGAAGCATCAAACTCAAAGAAGCCGTTTACTACTATTGATGATGTTTTGAAAGGACTGGTAGAATGGCTTTGTGCACAGTTGAAGAAGCCTTCTTATCCTACTCGTGGTATCCCAACTGCTATCAATTGCTTAGCAACTCTACTTAAGGAACCTGTGGTCAGGTCATCCTTTGTTGTAGCCGATGGGGTCAAGCTGCTTGTACCATTGATTTCTCCAGCATCCACACAACAATCTATGCAGTTGCTTTATGAAACGTGTCTTTGCATTTGGCTCTTGTCCTACTATGAACCAGCAATAGAATTCTTGGCTACTTCTAGAACCCTTCCGCGACTTATTGAAGTTGTTAAGAGTTCTACAAAAGAGAAGGTTGTTAGAGTTGTTGTCTTGACCCTTAAGAACTTACTGTCAAAAGGGACATTGGGTGCTCAAATGGTTGACCTTCAACTGCCACAAGTCGTTCAGAGTTTGAAGGCACAAGCGTGGAGTGATGAGGACTTATTGGAGGCGCTGAATTACCTGGAAGATGGGCTTAAGGATAACATTAAGAAACTAAGTTCTTTTGATAAGTATAAGCAAGAAGTTCTACTTGGCCATCTGGATTGGTCTCCCATGCACAAAGATCCTATATTTTGGCGGGAAAACATCAACAACTTTGAAGAGAATGACTTCCAGATTCTGAGGGTCCTAATAACAATTTTGGACACGTCCAGTGATCCAAGGACTCTGGCTGTTGCTTGCTTTGATCTTTCACAGTTCATCCAGTACCATTCTGCTGGGAGGATCATCGTGAATGATCTCAAAGCCAAGGAACGAGCGATGAAACTAATGAATCATGAGAACGCTGAGGTAACAAAGAATGCGCTGCTCTGCATCCAACGGCTTTTCTTAGGTTCAAAGTACGCAAGCTTCTTGCAGGCTTA 1478 0.4175 MRYLKKMEPRLVTRNTKSPNRIGKRYNRNFKLVGFSNNMDQAELSTEQVLRRDIPWETYMATKLISGTSLQLLRRYDHRSESHRAQLLDDDGPAYVRVFVCVLRDIFKEETVEYVLALIDEMLTANPKRARLFHDRSLADEDTYEPFLNSRLLWKGNWFIQEKSCKILALIVSARPRNQNGIVPNGEASNSKKPFTTIDDVLKGLVEWLCAQLKKPSYPTRGIPTAINCLATLLKEPVVRSSFVVADGVKLLVPLISPASTQQSMQLLYETCLCIWLLSYYEPAIEFLATSRTLPRLIEVVKSSTKEKVVRVVVLTLKNLLSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNYLEDGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDPIFWRENINNFEENDFQILRVLITILDTSSDPRTLAVACFDLSQFIQYHSAGRIIVNDLKAKERAMKLMNHENAEVTKNALLCIQRLFLGSKYASFLQA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00685 492 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 40 492 - -
Bva08g00685 492 Gene3D - 38 371 IPR011989 -
Bva08g00685 492 Pfam V-ATPase subunit H 43 363 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bva08g00685 492 Pfam V-ATPase subunit H 369 481 IPR011987 GO:0000221|GO:1902600
Bva08g00685 492 SUPERFAMILY ARM repeat 46 483 IPR016024 -
Bva08g00685 492 Coils Coil 452 472 - -
Bva08g00685 492 PIRSF V-ATP_synth_H 31 491 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bva08g00685 492 Gene3D - 383 484 IPR038497 -
Bva08g00685 492 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 40 492 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00685 Bva-Chr8 3549692 3554441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00685 39 492 Primary Pumps ATPases(2) AT3G42050 80.176 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00685 K02144 - gmx:100788723 800.045