Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00683 ATGTCCCAAGATTACCACCAAGGAATCTTCAGCTTCTCGAATGGGTTCGAGAGATCCACTATACCTCAGCAAGAACATCACCACCATCATCCTccgcagcagcagcaacactTAGCACAACAGATCCGAAGAGACAAAGTGAGGGTGCAAGGCTACGACCAGCCACCACCACCGCCATTAGTGGGGATTGAAGAAGAGGAATCCGGAGGCCTTCCTGTGTATGAAACTGCAGGGATGTTATCAGAGATGTTTAATTTCCCTCCAGCCGGAGCCACCGCCGCTGAATTGTTGGAACAACCCATGACCGCCACGTATAGATCCTCTTCCAGGCCACAACCAGTGGCCACCGCCGAGTGGTACGGAAACAGACAAGGAGGAGGGATCATTACTGGTTTGGGACCTTTGGGGGATTCAAAGAATCAAAACAGTGTGCATACCCGTGGTGACAGTATAGTTCAGCATCAGCAACACCACCACCGCCACCATCATCATCAGATTTCAAACATTAATGCAGACTCAGCTGCTGCCATGCAGCTCTTCCTCATGAACCCACAAACAAGATCGCCTTCTCCACCAACTACTAATCATAGTCCTGTAACTGCTGCAGCAGCTTCTTCCACGCTCCACATGCTGCTTCCCAATCCTTCCACTTCTCTTCAAAACTTTACCGGTTCTGGAGCAGCTGGGCCAGGAGGGGGTTTTGGTCAATTCACGTGGGTGCCAGATAGTGCCCACGAAGGAGGCACCACCACCGGCCACCAACTCAACAACAATCCACCCGAAATTGGAGGCGGCGTTGTGGAAGGTCAAGGTCTTTCGTTGTCATTGTCCTCTTCATTACAACACTTGGAAGCAGCGAAAGCCGAGGAATTGAGGATGGGAGACAGCGGGTTCTTGTATTACAATCAAGGTGCTGGAGGGTCTTCTGCTTCACAGTATCCGTACAAGAATTTCGCAAGCCATAACCAACCATTGCATTTACAAGGAGCAATAGGACAGAACCACCAGGCTCATTTCGGATTCGGGTCATCTATAGGTGTAGTGAATGTGCTGAGAAATTCAAAGTACGTTAAGGCTGCTCAAGAATTGCTCGAAGAATTCTGCAGTGTCGGGAGAGGCCAGTTCAAGAAGAGCAAACTCTCTAGGCAGAACTCAAACCCTAATTCGAATCCAGGTGCTGGTGGTGGAGCTGGTGCATCTTCGTCTTCATCAAAAGATCTTCCTCCTTTGTCAGCAGCTGATAGGATTGAACATCAAAGAAGGAAGGTCAAACTACTATCCATGCTTGACGAGGTGGATCGAAGATATAACCACTACTGCGAGCAAATGCAAATGGTGGTGAACTCATTTGACTTGGTGATGGGTTTCGGGGGGGCGGTGCCGTACACGGCGCTGGCACAGAAAGCAATGTCTCGGCATTTCCGGTGTCTGAAGGATGCGATAACAGCCCAGCTGAAGCTTAGCTGCGATGTGCTTGGGGAGAAAGATGGTGCGGGGACATCAGGTTTGACCAAGGGAGAGACACCAAGGCTTAAGTTGCTAGAGCAAAGCCTTAGGCAGCAAAGAGCCTTCCACCAGATGGGGATGATGGAACAGGAAGCCTGGAGACCCCAGAGAGGTTTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCCAGACAGACTGGGTTATCGAGAAATCAGGTATCGAACTGGTTCATTAATGCCAGGGTTCGATTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACTCAAGGAAGTAGAGGGtgcagaagagagagaaaagaaccAAAGCAATAGCAACAGCAATAGTAATGGTGGCCACGTCGCACAGACTTCAACGCCCACAACCACAACATCAACAGCAACAGCGCCACCACctccaacaacaacaacaggCAAAAGATCCGATATCAATGCTACCGAAAGCGACGCTTCACTCGTTGCAATCAATAGACAAGCCTACTCGGAAAACCAAGCAAAACAGTCAAGCTCGTCCACCTCCATTATGGCTCCCAATCCCATTTCCACCACGAACGCCACCACCTCCGAGGTGGCGCCACCCGTGTCTCAGTCTTTCGATTCAGACCTGCCAGTCCACAGTCGATCAATACCTAACGATGATGCGTGTCGCCATGGCAGCTTGGTTACTGCCGACTATGGGACCACCTCTGCTGCTGCTGACATTGGATCCACACTCATTAGATTTGGGACCACTACCGCCGGTGATGTGTCACTCACTCTAGGGCTACGTCATGCCGGAAACGTGCCTGAGAAAACTCCCTTCTCGGTTAGAGACTTTGGAGCCATTTA 2375 0.4909 MSQDYHQGIFSFSNGFERSTIPQQEHHHHHPPQQQQHLAQQIRRDKVRVQGYDQPPPPPLVGIEEEESGGLPVYETAGMLSEMFNFPPAGATAAELLEQPMTATYRSSSRPQPVATAEWYGNRQGGGIITGLGPLGDSKNQNSVHTRGDSIVQHQQHHHRHHHHQISNINADSAAAMQLFLMNPQTRSPSPPTTNHSPVTAAAASSTLHMLLPNPSTSLQNFTGSGAAGPGGGFGQFTWVPDSAHEGGTTTGHQLNNNPPEIGGGVVEGQGLSLSLSSSLQHLEAAKAEELRMGDSGFLYYNQGAGGSSASQYPYKNFASHNQPLHLQGAIGQNHQAHFGFGSSIGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKSKLSRQNSNPNSNPGAGGGAGASSSSSKDLPPLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLVMGFGGAVPYTALAQKAMSRHFRCLKDAITAQLKLSCDVLGEKDGAGTSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKEVEGAEEREKNQSNSNSNSNGGHVAQTSTPTTTTSTATAPPPPTTTTGKRSDINATESDASLVAINRQAYSENQAKQSSSSTSIMAPNPISTTNATTSEVAPPVSQSFDSDLPVHSRSIPNDDACRHGSLVTADYGTTSAAADIGSTLIRFGTTTAGDVSLTLGLRHAGNVPEKTPFSVRDFGAI 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00683 791 MobiDBLite consensus disorder prediction 617 661 - -
Bva08g00683 791 MobiDBLite consensus disorder prediction 22 44 - -
Bva08g00683 791 MobiDBLite consensus disorder prediction 608 661 - -
Bva08g00683 791 MobiDBLite consensus disorder prediction 677 718 - -
Bva08g00683 791 SMART prehox3 345 483 IPR006563 -
Bva08g00683 791 SMART HOX_1 535 599 IPR001356 GO:0003677
Bva08g00683 791 Pfam Associated with HOX 350 482 IPR006563 -
Bva08g00683 791 MobiDBLite consensus disorder prediction 378 414 - -
Bva08g00683 791 SUPERFAMILY Homeodomain-like 537 602 IPR009057 -
Bva08g00683 791 Coils Coil 598 618 - -
Bva08g00683 791 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 58 780 - -
Bva08g00683 791 Gene3D - 538 600 - -
Bva08g00683 791 Pfam Homeobox KN domain 552 591 IPR008422 GO:0003677|GO:0006355
Bva08g00683 791 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 58 780 - -
Bva08g00683 791 ProSiteProfiles 'Homeobox' domain profile. 532 595 IPR001356 GO:0003677
Bva08g00683 791 MobiDBLite consensus disorder prediction 378 408 - -
Bva08g00683 791 CDD homeodomain 535 596 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00683 Bva-Chr8 3521264 3528456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00683 1 582 Homeobox Transcription Factor Family AT4G36870 50.565 9.44e-150 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bva08g00683 POX 1.5e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00683 - - jre:108995343 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00683 08 3521264 3528456 Bva11g01650 11 15092803 15099592 BWGD
Bva08g00683 08 3521264 3528456 Bva08g00683 08 3521264 3528456 ECH