Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00654 ATGCCATCGGAATCTGGTGAGAATCGACGAGCAGCCAAGCCTCAACACCCGGGAGCTCCACCACCGGAACAAGAGCATCTCCCATGCCCTCGTTGCGACTCCACCAACACTAAGTTCTGTTACTATAACAACTACAACTTTTCACAGCCTCGTCACTTCTGCAAGTCCTGCCGCCGGTATTGGACTCATGGCGGCACCCTTCGTGACATCCCCGTAGGCGGCGGCAGTCGTAAAAACGCCAAGCGCTCCCGTAATTGCTCTGTTACTTCTTCTTCCACTATTGTTACTTCAGGTTCTGCTCAGGAACAACGATTGCCTGCGACCCCCGTATTGGTGCCTATTGCTGCCAACCAAGGAGCGTCTATGCAGTTCGTTGCTACTGGTGGCGTTGATGGTGATGTCAAGCCTAACATGAATGTGTGTGGAAGCTTCACTTCATTGCTCAGCAATACCCAAGCTCCTACCTTTCTTGCTTTAGGTGGCTTCGGATTGGGGCTTGGACATGGATTTGAAGATATGGGATTTGGGATTGGAAGAGGAGGTTGGGCTTTTCCCGGGATGGTAGACGGTAACACTGCTGGCGCTGTTGGGGTCCCTGGGGTTGGCAATTCATGGCAATTAGAGAGTGGAGAAGGTGGATTTGTTGGCGGAGACTGCTTCTCTTGGCCGGGGCTGGCGATTTCAACACCTGGAAATGGTCtgaaata 707 0.5219 MPSESGENRRAAKPQHPGAPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRNCSVTSSSTIVTSGSAQEQRLPATPVLVPIAANQGASMQFVATGGVDGDVKPNMNVCGSFTSLLSNTQAPTFLALGGFGLGLGHGFEDMGFGIGRGGWAFPGMVDGNTAGAVGVPGVGNSWQLESGEGGFVGGDCFSWPGLAISTPGNGLK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00654 235 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 232 IPR045174 GO:0003700|GO:0006355
Bva08g00654 235 Pfam Dof domain, zinc finger 25 81 IPR003851 GO:0003677|GO:0006355
Bva08g00654 235 MobiDBLite consensus disorder prediction 1 28 - -
Bva08g00654 235 ProSiteProfiles Zinc finger Dof-type profile. 27 81 IPR003851 GO:0003677|GO:0006355
Bva08g00654 235 ProSitePatterns Zinc finger Dof-type signature. 29 65 IPR003851 GO:0003677|GO:0006355
Bva08g00654 235 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00654 Bva-Chr8 3392756 3394025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00654 1 235 C2C2-Dof Transcription Factor Family AT3G50410 50.193 3.66e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva08g00654 zf-Dof 3.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00654 - - vvi:100855283 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00764 10 6173077 6174426 Bva08g00654 08 3392756 3394025 ECH
Bva08g00654 08 3392756 3394025 Bva08g00654 08 3392756 3394025 ECH