Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00653 ATGTCCTTTTCGTTGTTTTCAACACCGCAACAGCAACAGTCGCCGTTTCAACCTCAAcagcagcaacagcagcagTCTCCTTTCCAGCCGGGCAGTCTGTTCGTTCCGCAACAGCAACAATttcagcagcagcaacaacaacaatttcagcagcagcagcaacagcaacagcaacagTTGTTTCTGTTCACTAACGATAAAGCCCCCGGGAATTATAGCACCAAATGGGCGGATCTCCATCCTGATTCCCAGAAGACTCTTCTTCAGATCGaGGAGAAGATATTGGAGTATAGGGATGAGAGCCAGAGGCTAGATCAGTGTAGCCGTCTATATGATTCTTCGGTTTCAAACGATGGGTTTGAGCTTGATGCAAGCCATATTGTGCAGGAACTTGGTGGAATTAGCGCTGCCATGGAGCGACAGAAAACATTGCTGCAGGAACTGATGTTTGTTGTCAAGGATATGTTACGCAACACAGAGGTTGCTGTTCGTTCTTTCATGATGCTACGTCCAAGATTCCTTCATCCCAGCGGAGGTGTTTCTAGTGCTACTGCACCTTCGCAGACTCCTGGAGCAACTGTAACACCTAGTTCCGGTAGCCAACGGATGGCTACATCTATTACGCCTGTATTTGACTTCTACAGTGGGCTTCCAAAGAAACCATCACCCTTTTTACAGCAAACAGTTTCAAGATTTGAGAAGTATCTCGGTGAATGCCGTCAGTGGATTGAAGAGTTAGAGCAGTTGCTACTCTTAGACACTGAGAGAAACATTTCTAATAACGGATCCTCATTATTGCAATCTCTTCCCAAGGTCATGACAAATGTGCATGACTTTTTTGTTCACGTGGCTGCAAAGGTTGAGAGTATCCATCTGTACATTGAATCTATGAAATCAGCTTACCTAGCTGATCAGCGCCGCCGAGGGGAGGTGAATGATCCATTCTTAGAGGCTGATCGGAGAGAAACAGCAAGACAGGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGTAAATTCACAACCATCAACACAAGTAGCTGGGTTGTTTTCCAGTTCAGGAACTCACGCAGCACCGAATGCTACCCAGACATCTGTGGCAACTTCATCAGGAAGCGGGTTCTCGCTTTTCAACATGCCTTCTTCAGCTCCATCTTCCTCCATGTCATCTTTGTTTACGACACCAACAACTTCTGCTCCAGGATCCTCTTTGTATGGACCGTCTAGTGCCACACCCCAAGCCTCACTTTTTGGTTCTTCAGCTTCCTTATTTGCCCCTTCTTCAACTCCCTCTCTGTTTAGTACAATTCCCGGAGCTTCACCACTTTCAACGCCATTTGCTTCAGGTGCTGCAACAGGATCAGGAGCGAGCTTTAATTCGAAGTCATCACGACAAAAATCCAGAACTACTCGACGTTA 1427 0.4373 MSFSLFSTPQQQQSPFQPQQQQQQQSPFQPGSLFVPQQQQFQQQQQQQFQQQQQQQQQQLFLFTNDKAPGNYSTKWADLHPDSQKTLLQIEEKILEYRDESQRLDQCSRLYDSSVSNDGFELDASHIVQELGGISAAMERQKTLLQELMFVVKDMLRNTEVAVRSFMMLRPRFLHPSGGVSSATAPSQTPGATVTPSSGSQRMATSITPVFDFYSGLPKKPSPFLQQTVSRFEKYLGECRQWIEELEQLLLLDTERNISNNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHLYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPVNSQPSTQVAGLFSSSGTHAAPNATQTSVATSSGSGFSLFNMPSSAPSSSMSSLFTTPTTSAPGSSLYGPSSATPQASLFGSSASLFAPSSTPSLFSTIPGASPLSTPFASGAATGSGASFNSKSSRQKSRTTRR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00653 475 MobiDBLite consensus disorder prediction 1 40 - -
Bva08g00653 475 SUPERFAMILY beta-sandwich domain of Sec23/24 9 94 - -
Bva08g00653 475 MobiDBLite consensus disorder prediction 337 358 - -
Bva08g00653 475 MobiDBLite consensus disorder prediction 180 201 - -
Bva08g00653 475 MobiDBLite consensus disorder prediction 178 201 - -
Bva08g00653 475 MobiDBLite consensus disorder prediction 313 358 - -
Bva08g00653 475 MobiDBLite consensus disorder prediction 447 467 - -
Bva08g00653 475 PANTHER NUCLEOPORIN P58/P45 6 469 - -
Bva08g00653 475 MobiDBLite consensus disorder prediction 313 332 - -
Bva08g00653 475 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 469 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Bva08g00653 475 MobiDBLite consensus disorder prediction 388 412 - -
Bva08g00653 475 MobiDBLite consensus disorder prediction 447 475 - -
Bva08g00653 475 Gene3D - 220 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00653 Bva-Chr8 3386674 3390723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00653 60 475 NAC Transcription Factor Family AT4G37130 67.517 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00653 K14307 - gmx:100776992 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00653 08 3386674 3390723 Bva08g00653 08 3386674 3390723 ECH