Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00642 ATGGCAGAAATGCTTCTGGAAGCGGCCGTTGGAGCCGTTGTTGGAGAACTGCTGAAAGCAATTTTAGAAACGAAGGACAGGGCAATCAAGTTTAGGCCCACCCTAGAACGCCTTGAAGATAAGTTGAGGAGATTAGAACCACTGATCAAACAGATAGCAGAATATGACCGAAGATTAGATCGGCCAAAGGAAGAAATGGAGGGGCTCATCAAACAAATGGAGGAGTGCAAGAAACTTGTTCTCAAGTGCGCTGAAATCAATTGGTGGCAATGTTGTTTTAGACCTCACTACCAGGAAGAACTTGACGAATTGGACAACTCACTTGATAAGTTATTAAGTTCTGATTTGCAAGTTCAGATCGCGCGGGACCAAAGGGAGAACCTTTTGGAGATCAGGGAGATGCGTATGGATATCAAGAAGCTCAATGTGGGAATTGTAGGAAAGGGTCCATGCTCAGCTCCAGATCCACCAGAATTTACCGTTGGATTGGATATTCCTCTGAAGGAGTTGAAGCTGAAGCTGAAGCTGTTTGAGTCAGGTGTCTCGGTGCTTGTATTGACCGGTTTAGCAGGTTCGGGAAAGACTACATTAACGAAAATGCTTTGTTCGGATGAGCAAGTCAAAGGAAAATTCAGGGAGAATATCTTCTTTGTCACCTTTTCAAAATCGGCAAACATAACTACCATCGTGCAGAAATTCTTTCAACACATAACTAAACGGGTGCCTGTGATTCAAGACGGTGAAGATGCTCTTAACCAATTGGAAATTTTGCTCAAGTCAATTGAGAAAAGTCCAATCCTGTTGGTTTTGGATGATGTTTGGCCTGAATCAGAATCACTTGTCGATAATTTTATGTTGAGTAGAATGTCAGACCACAAGATTTTGGTGACTTCAAGGTTTGCAATTAAAAGATTTGGCCCTCCACATGTCTTGAAATCCCTTGGTGATGATGATGCTATGAAGCTTTTCCGATACTGGGCATCTCTCAAGGAGAACTCTTTTGATATTCCTGACGATCTCGCGAGAGAGATAGTAAGAGGGTGTAGTAATTCGCCCTTGGTGCTTAAAGTGATTGGCAAGTCACTCTGCCAGCAACATCCTGTGGTGTGGCAAAGCCAGGCAAAGAAATTGTCGAGGGGACATTCAATTCTTGACTCCAGTACTTATCTGCTTGAATGTCTCTGGAAAAGCTTTGATGTCTCAGATCCCGAGGCAATCATTAAGGAGTGTTTCATGGACCTGGGATTATTTCCTGAAGACCAGAGGATACCTGCTGCAACCCTTGTTGATATGTGGGCAGAACTGTATGATGAAGATGCAGATGACTTGAATGCAATGGAGAAAATTTATCAACTGGCCAACAGAAACGTGGTTGACATTGTCGTGACGAGCAAAGTTGCACGTGACTTGGGTAATTACTACAATGATCACTTTGTCATCCAGCATGATCTTCTTAGGGAGCTAGCCATTCATAAAAGTAGCCAGGAGCCAGAGTCACAGAGAAACAGATTGATTATTGACATAAGTGGAAATAATCTACCCAAGTGGTGGGCTGCACGCCAGGACTATATCATAGCTGCCCACACACTGTCCATATCAACTGATGAAGTATTCAATTTAGATTGGTGCAACATGCAAGCACCCCAAGTTGAGGTTCTAGTTTTGAACCTTAAAGCAAAGAAGTACACCTTACCAAAGTTCATGGACAGTATGTCAAAACTGAAAGTTGTTGTAATCACAAACTACGGTTTCTATCCTTCTGACTTGGAGAATTTCGAGCTTCTTGGTTCTTTACCCGATCTTAAAAGAATCAGATTGGAGCATGTTTCCATTCCTTCCCTTGGCAGGGCCTCAGTGCAATTACAGAATCTGCGCAAGCTATCTCTGTTTATGTGCAATATgaataaaacttttgaaaattgtaCCTTCCAAGTTTCAAATATGCTTCCAAAATTAGAGGAGCTGGCCTTGGACTACTGCAATATAGTGGAATTACCTGCGGGGTTCACTGATATTGTATGCTTAAAGAAGCTCTGTATCACAAATTGCCataaattttctgcacttcctGAAGGAATTGGCAAACTGGTGAATTTGGAATCACTAAGGCTGAGTTGCTGTAGTGATATAGAAGATTTGCCAGACTCAATCAGAAGCCTTGGAAAGCTGAACTTTCTTGATATCTCTGATTGCATAAGTCTTAGTAAATTGCCAGAGCACATTGGAGAAGTGTGTAATTTAGAAACGTTGTACGTAAGGGGTTGCTCGAGATTAAGTGAGTTGCCACCATCAATTAAGGCCCTTGAGCAATTAAGGAGGGTGGTATGTGATGAAGATACAGCTATCTTATGGGAACCTTTCAAAACCATCCTTGGTGGTCTAAGGATAGAGGTACCCAAAGTTGATATCAACTTGAATTGGCTTCATAATCATTACTG 2438 0.4159 MAEMLLEAAVGAVVGELLKAILETKDRAIKFRPTLERLEDKLRRLEPLIKQIAEYDRRLDRPKEEMEGLIKQMEECKKLVLKCAEINWWQCCFRPHYQEELDELDNSLDKLLSSDLQVQIARDQRENLLEIREMRMDIKKLNVGIVGKGPCSAPDPPEFTVGLDIPLKELKLKLKLFESGVSVLVLTGLAGSGKTTLTKMLCSDEQVKGKFRENIFFVTFSKSANITTIVQKFFQHITKRVPVIQDGEDALNQLEILLKSIEKSPILLVLDDVWPESESLVDNFMLSRMSDHKILVTSRFAIKRFGPPHVLKSLGDDDAMKLFRYWASLKENSFDIPDDLAREIVRGCSNSPLVLKVIGKSLCQQHPVVWQSQAKKLSRGHSILDSSTYLLECLWKSFDVSDPEAIIKECFMDLGLFPEDQRIPAATLVDMWAELYDEDADDLNAMEKIYQLANRNVVDIVVTSKVARDLGNYYNDHFVIQHDLLRELAIHKSSQEPESQRNRLIIDISGNNLPKWWAARQDYIIAAHTLSISTDEVFNLDWCNMQAPQVEVLVLNLKAKKYTLPKFMDSMSKLKVVVITNYGFYPSDLENFELLGSLPDLKRIRLEHVSIPSLGRASVQLQNLRKLSLFMCNMNKTFENCTFQVSNMLPKLEELALDYCNIVELPAGFTDIVCLKKLCITNCHKFSALPEGIGKLVNLESLRLSCCSDIEDLPDSIRSLGKLNFLDISDCISLSKLPEHIGEVCNLETLYVRGCSRLSELPPSIKALEQLRRVVCDEDTAILWEPFKTILGGLRIEVPKVDINLNWLHNHY 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00642 812 PRINTS Disease resistance protein signature 183 198 - -
Bva08g00642 812 PRINTS Disease resistance protein signature 348 362 - -
Bva08g00642 812 PRINTS Disease resistance protein signature 260 274 - -
Bva08g00642 812 PRINTS Disease resistance protein signature 718 734 - -
Bva08g00642 812 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 5 810 - -
Bva08g00642 812 Gene3D - 403 492 IPR036388 -
Bva08g00642 812 Pfam NB-ARC domain 172 379 IPR002182 GO:0043531
Bva08g00642 812 Gene3D - 313 402 IPR042197 -
Bva08g00642 812 Coils Coil 244 264 - -
Bva08g00642 812 SUPERFAMILY L domain-like 481 774 - -
Bva08g00642 812 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 8 140 IPR008808 -
Bva08g00642 812 Gene3D Ribonuclease Inhibitor 527 781 IPR032675 -
Bva08g00642 812 Gene3D - 149 305 IPR027417 -
Bva08g00642 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 414 IPR027417 -
Bva08g00642 812 Gene3D - 9 120 IPR036537 GO:0007166
Bva08g00642 812 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Bva08g00642 812 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 5 810 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00642 Bva-Chr8 3342766 3346329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00642 597 772 WRKY Transcription Factor Family AT4G12020 30.556 2.79e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00642 - - gmx:100812310 844.343