Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00638 ATGGAGTTGAGcttggatttgagtttgggCTTTGTCCCCAAAACTGTTTCTGAGTTTCTCGGTGAAATTTCGAGGAGCAGAGACAGGTCTGAGAAGTTATCGATGCTTGATGACTTTGTCAAGAGATTGGAAGAGGAAATGAGGAAGATCGATGCCTTTAAACGCGAGCTTCCCCTTTGCGTGCTTCTCGTAAACGATGCTATAACGAGATTGAAGAAGGAAGCAGCGCGGTGCATGGAAATTGAAGATCGACCTGTAATTGAAGAATTCATACCATCATCATCGAAAACAAGTTCTGGAGAAAATGGGCAGTTGAGTATTATGGGAAGGGATGGCTGCGAGAAGAAGAATTGGATGAGTTCTGCTCAGTTGTGGAGCACAGAAACCAAATCGAGAAATGAACATGACGACTGGTCAGTGCCCGAGAATCCAATTCAATCACAGAATCAGAAAAGCAGGGGAGAGGCATTTATACCCTTCAAGGGAAATTCTTGTTTCCAAAAGGAGCTGATGAAGGAAGACAAGGAGGTTTCACAAGTTCCCAGCCTTTGTCTGATGACTCCACCGTCTGAACTGCATAGCAATTCAAAGCTTGGCAGCAAAGGAAGTAATGCTTCATCTTTGCTTACACAATCGCTGCAACAAACTGCAAGAAAACAGAGACGATGTTGGTCTCCCGAGCTTCACAGGCGTTTCGTTGATGCACTTCAACAGCTAGGAGGAGCACAAGTGGCCACTCCTAAACAGATTAGAGAACTAATGCAGGTGGAAGGCCTGACAAATGATGAAGTGAAAAGCCATTTGCAAAAATACAGACTTCATGTTAGAAGAGTTGCCCCAACAAATGGCTTGTGGACGGGCCAAGATCAATGTGAAGAGATATCAAAGGGAAAGTTATCAGAGTCTGGTTCCCCGCAAAGTCCTCTTCTTCTAGGAGGCTCTGCTAAAGGTTTCTCCTGCTCTGGACGCAGCAGCACGGATGCGGAAGAAGACGAGAAATCAGATTGCCACAGTTGGAGAGACGGTCATAAATTTTCATTATTGGGAGTTGTTGGATGCCACCCCACGTGCTG 1073 0.4473 MELSLDLSLGFVPKTVSEFLGEISRSRDRSEKLSMLDDFVKRLEEEMRKIDAFKRELPLCVLLVNDAITRLKKEAARCMEIEDRPVIEEFIPSSSKTSSGENGQLSIMGRDGCEKKNWMSSAQLWSTETKSRNEHDDWSVPENPIQSQNQKSRGEAFIPFKGNSCFQKELMKEDKEVSQVPSLCLMTPPSELHSNSKLGSKGSNASSLLTQSLQQTARKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRVAPTNGLWTGQDQCEEISKGKLSESGSPQSPLLLGGSAKGFSCSGRSSTDAEEDEKSDCHSWRDGHKFSLLGVVGCHPTC 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00638 357 MobiDBLite consensus disorder prediction 130 152 - -
Bva08g00638 357 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 343 IPR044787 GO:0003700|GO:0006355
Bva08g00638 357 Gene3D - 218 275 - -
Bva08g00638 357 Pfam Myb-like DNA-binding domain 221 272 IPR001005 -
Bva08g00638 357 SUPERFAMILY Homeodomain-like 216 277 IPR009057 -
Bva08g00638 357 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 343 - -
Bva08g00638 357 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 219 274 IPR006447 GO:0003677
Bva08g00638 357 Coils Coil 36 56 - -
Bva08g00638 357 MobiDBLite consensus disorder prediction 296 338 - -
Bva08g00638 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 216 276 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00638 Bva-Chr8 3321219 3322978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00638 1 269 G2-like Transcription Factor Family AT4G37180 43.369 2.72e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva08g00638 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00638 - - zju:107424698 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01685 11 15258257 15260261 Bva08g00638 08 3321219 3322978 BWGD