Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00633 ATGAATCACAATCTTCCTCTTCAATTCACCATGCGTTGGTTACCCACTATTTCCTTCTCCACTTCCAAATCTTCTTCCACCATCAAATGCTCTTCCTCCTCTGCCGTCGTCGATGCTGACCacccaaagaagaaaaccGGCAATGCTACCCGTGAGGCTGCTGGCGGTGGTGGTACCTCTAGTTGGCTTTGGGGTGTCGGAAAAAAGTCTAGCCGGGGGAAGAAGCTGCGTCCTATAGGCGACCATGATGGCAAGTCCCCTCCGAGGTCGTGGCAAGACTCGGAGGATGACCATCCTGTGCCTTTCTCTCCGCCTGAACGCACCTACGTTCGCTCATCATCATCGCCATCTTCTGTTGCGCCTCAGCCCTTGCCCTTACCCGAATCCTTACTTCGCCAGAAAGACGGTGACTGTCCTCTCCCTTCGCCTAATTCTGTGCATGCCCCAACCACCACCGCCGCCGCCGCAGATAGACCTGTTGTCGCTCTCGATGGAATCTATCCTGTCTTTCGGATGCGGAgCGTTTTTGCTGGCCAAGGCATGAGGAGAAATATAGAGCAATCATCTAGGGTGGCGATTCAAGACCTGAGTGGTTCTGAAAACGCTCGTGATAACTCTAGGAGTGCTCCAGCGAGTCCTTTTTCCAGTCCCTCACAGAAAGTGAGAACTGGTGATTTTGTGCCTTATCACTATGTGCCTCCTAAAGGAAATCAATTCTGGTCTGCACCAGAGATGCCCATCTCAGAAGCCTCAGCAAGGCAGCCACCTCCTGCATTCTTGGATTTAACTGCATTTGGCTCTGATAATTCTCCCCTTCACAGTCCACCAGGGTTAAGTCCTCGGCCAAATCTCAGAAGCCCTAGCAGATCTTCATCACCAATACATCCTAGGTTATCCCTGGAGGTACGTCGTGACAGTAATGGCCCTGTCAACGTTCACCCATTACCCCTGCCTCCCGGGGCTGGCCTGCCTTCAACATCTCATAATTATTCCCAAGCTTTGGGTAAGTCCGACTCCCTGCCAATGAAAAGCCAATggcaaaaaggaaaacttaTTGGGCGTGGTACATTCGGAAGTGTTTATGTTGCCACCAATAgGGAAACTGGAGCGTTATGTGCCATGAAGGAAGTAGAATTATTTCCTGATGATCCTAAATTTGCAGAGTGTATGAGACAGTTAGAGCAGgaaaTCAAACTTCTTAGCCAACTGAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAATAGTTGAAGACcggttttatatttatctagaATATGTGCATCCCggttcaattaataaatatgtccGTGAACATTGTGGTGCCATAACAGAATCAGTTGTACGGAATTTCACCCGCCATATTCTTTCTGGGTTGGCTTATTTGCATAGCAAAAAGACAATTCATAGGGACATTAAAGGGGCTAACCTACTTGTTGATTCTACTGGGGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCATCTAACTGGACAAGTCGCTGAGCTATCTATGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTATGCAAGCAGTGATGCAGAAGGATAACAGCTCCGATCTAGCTTTTGCTGTTGATATTTGGAGTTTGGGTTGTACAATCATTGAAATGTTCACAGGGAAGTCTCCTTGGAGCGAATATGAAGGAGCTGCAGCCATGTTTAAGGTTATGAGGGATACCCCTCCAATACCTGAAACATTGTCATCAGAGGGTAGAGATTTCCTGAGGTGCTGCTTTAGAAGAAATCCAGCAGAGAGAGCCAGTGCTGCAGTTTTACTAGAACATCCATTCTTGAGAAACTG 1829 0.4609 MNHNLPLQFTMRWLPTISFSTSKSSSTIKCSSSSAVVDADHPKKKTGNATREAAGGGGTSSWLWGVGKKSSRGKKLRPIGDHDGKSPPRSWQDSEDDHPVPFSPPERTYVRSSSSPSSVAPQPLPLPESLLRQKDGDCPLPSPNSVHAPTTTAAAADRPVVALDGIYPVFRMRSVFAGQGMRRNIEQSSRVAIQDLSGSENARDNSRSAPASPFSSPSQKVRTGDFVPYHYVPPKGNQFWSAPEMPISEASARQPPPAFLDLTAFGSDNSPLHSPPGLSPRPNLRSPSRSSSPIHPRLSLEVRRDSNGPVNVHPLPLPPGAGLPSTSHNYSQALGKSDSLPMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVELFPDDPKFAECMRQLEQEIKLLSQLKHPNIVQYYGSEIVEDRFYIYLEYVHPGSINKYVREHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSTGVVKLADFGMAKHLTGQVAELSMKGSPYWMAPELMQAVMQKDNSSDLAFAVDIWSLGCTIIEMFTGKSPWSEYEGAAAMFKVMRDTPPIPETLSSEGRDFLRCCFRRNPAERASAAVLLEHPFLRN 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00633 609 Gene3D Transferase(Phosphotransferase) domain 1 342 609 - -
Bva08g00633 609 MobiDBLite consensus disorder prediction 195 222 - -
Bva08g00633 609 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 11 609 - -
Bva08g00633 609 SUPERFAMILY Protein kinase-like (PK-like) 340 608 IPR011009 -
Bva08g00633 609 SMART serkin_6 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00633 609 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 11 609 - -
Bva08g00633 609 MobiDBLite consensus disorder prediction 32 152 - -
Bva08g00633 609 MobiDBLite consensus disorder prediction 324 338 - -
Bva08g00633 609 MobiDBLite consensus disorder prediction 74 102 - -
Bva08g00633 609 Pfam Protein kinase domain 347 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00633 609 MobiDBLite consensus disorder prediction 195 228 - -
Bva08g00633 609 ProSiteProfiles Protein kinase domain profile. 346 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00633 609 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Bva08g00633 609 MobiDBLite consensus disorder prediction 248 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00633 Bva-Chr8 3299055 3303477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00633 208 609 MAP Kinase Kinase Kinase AT5G66850 70.258 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva08g00633 Pkinase 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00633 - - cam:101502514 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00633 08 3299055 3303477 Bva11g01688 11 15274729 15279275 BWGD