Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00629 ATGGGTCTCTGCACTTCAAAGCCCTCTGCAAATCTTACACTTCAATCCCCCAAATCCGATACTAACTCACCCAGGAACAGCCACATACCTGCTGAAGCCAACGCTCTCCCAGTTAACGACACTTCAAGCTCCGTGAATGGAGAAAACCCTAGCAATGAGCGAACCAAGGAGAAGAACGACAACGAGAATGGTAAAAAATCGCCCTTCTTTCCGTTTTACAGTCCAAGTCCGGCGCACTATTTGTTCTCGAAGAAGTCTCCGGCAAGATCTCCGGCAAATGTTAGCTCGAACTCCACGCCGAAGCGCTTTTTCAAGCGGCCGTTCCCGCCACCATCGCCTGCGAAGCACATAAGAGCTGTGCTGGCCAGGCGGCACGGTTCAGTGAAGCCTAATGAGGCTACGATCCCGGAAGGGAGTGAAGCAGAGGTGGTTACTGGGCTGGATAAGAGTTTTGGCTTCTCCAAGCATTTCGGGAATAAATATGAGCTTGGAGATGAGGTCGGAAGAGGGCACTTTGGTTACACTTGCGCTGCCAAATTTAAGAAGGGTGAGCTTAAAGGGCAACAAGTGGCTGTCAAAGTCATCCCAAAAGCAAAGATGACCACTGCCATCGCTATTGAGGATGTGAGAAGGGaagtaaaaatattgagaGCTTTGACTGGACATAAGAATCTAGTACATTTCCACGATGCATATGAAGATCATGATAATGTCTATATAGTAATGGAGTTGTGTGAAGGAGGGGAGCTTTTGGACAGAATACTATCAAGAGGTGGGAAATACACAGAAGATGATGCAAAAGCTGTCATGATACAGATACTGAATGTTGTTGCATTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCCGAGAACTTCTTGTTTACGTCCAAGGATGAAAACTCAGAGCTGAAGGCCATAGACTTTGGATTATCTGATTTCGTAAAACCAGATGAAAGGCTTAATGATATTGTTGGTAGTGCATATTATGTGGCCCCTGAAGTTCTACATAGAGCTTACAGTACAGAAGCTGATGTCTGGAGTATTGGTGTGattgcatatattttattatgcggcagccgtccattttgggcccGAACTGAGTCCGGAATCTTCCGTGCTGTATTGAAAGCTGACCCATGTTTTAATGAATCGCCTTGGCCCTCTTTGTCAGCTGAGGCAAAAGACTTTGTTAAGCgactattaaataaagatcCTAGGAAAAGAATGACAGCTGCGCAGGCTTTAAGTCATCCATGGATTAAAAACTATAAGGATATAAAAGTGCCTTTGGATATTCTAATATTCAAGCTTATGAAGACATACATGCGTTCCTCATCTCTACGGAAAGCAGCTTTAAGGGCTCTATCCAAGACGTTAACAGTGGATgaactattttatttgaaggaGCAATTTGCACTTTTGGAGTCAAACAAAAATGGCACCATAAGCttggaaaatatcaaaacGGCTTTGATGAAAAATGCAACAGATGCTATGAAGGAGTCACGCATTCCTGATTTTCTGGCATCGCTTAATGCGTTGCAATATAGAAGGATGGATTTTGATGAATTCTGTGCAGCCGCACTAAGTGTTCATCAACTTGAAGCCCTTGACCGGTGGGAGCAACACGCTCGCTGTGCCTATGAACTTTTTGAGAAGGATGGAAACAGGGCTATTGTCATCGAGGAATTAGCTTCGgAGCTTGGCCTTGGTCCATCTGTCCCAGTTCATGCTGTTCTTCATGATTGGATTCGGCACACTGATGGAAAATTAAGCTTCCTTGGATTTGTCAAATTGTTGCATGGTCCATCTCGAAGTCTTGCAAGAATTCAATA 1844 0.4219 MGLCTSKPSANLTLQSPKSDTNSPRNSHIPAEANALPVNDTSSSVNGENPSNERTKEKNDNENGKKSPFFPFYSPSPAHYLFSKKSPARSPANVSSNSTPKRFFKRPFPPPSPAKHIRAVLARRHGSVKPNEATIPEGSEAEVVTGLDKSFGFSKHFGNKYELGDEVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVHFHDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEDDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPCFNESPWPSLSAEAKDFVKRLLNKDPRKRMTAAQALSHPWIKNYKDIKVPLDILIFKLMKTYMRSSSLRKAALRALSKTLTVDELFYLKEQFALLESNKNGTISLENIKTALMKNATDAMKESRIPDFLASLNALQYRRMDFDEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLARIQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00629 614 Gene3D - 463 532 - -
Bva08g00629 614 ProSitePatterns Protein kinases ATP-binding region signature. 167 193 IPR017441 GO:0005524
Bva08g00629 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Bva08g00629 614 SUPERFAMILY Protein kinase-like (PK-like) 158 452 IPR011009 -
Bva08g00629 614 MobiDBLite consensus disorder prediction 1 70 - -
Bva08g00629 614 MobiDBLite consensus disorder prediction 36 50 - -
Bva08g00629 614 Gene3D Phosphorylase Kinase; domain 1 154 249 - -
Bva08g00629 614 PANTHER SERINE/THREONINE-PROTEIN KINASE 65 609 - -
Bva08g00629 614 SMART serkin_6 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00629 614 Gene3D - 441 602 - -
Bva08g00629 614 Pfam Protein kinase domain 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00629 614 ProSiteProfiles Protein kinase domain profile. 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00629 614 Gene3D Transferase(Phosphotransferase) domain 1 250 434 - -
Bva08g00629 614 MobiDBLite consensus disorder prediction 88 102 - -
Bva08g00629 614 ProSiteProfiles EF-hand calcium-binding domain profile. 465 500 IPR002048 GO:0005509
Bva08g00629 614 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 65 609 - -
Bva08g00629 614 SUPERFAMILY EF-hand 451 605 IPR011992 -
Bva08g00629 614 MobiDBLite consensus disorder prediction 83 112 - -
Bva08g00629 614 CDD STKc_CAMK 160 422 - -
Bva08g00629 614 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00629 Bva-Chr8 3280200 3285041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00629 1 607 EF-hand Containing Proteins AT3G50530 78.717 0.0 1012
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva08g00629 Pkinase 2.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00629 K00924 - jre:109018972 1044.26