Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00615 ATGGCGATAGACGCGACTGAAGCTGCCTCTCCATTGCCATACCAGAACACCCAATTCGGTCAGTCGCGCCACTTTTATGTTGCAGTAGACAGAATCCAGTTcaaaatgGAGACGTTGGTGGATCTGCTGAGTCTAGCTGATCGCCGTCCTTGCCTACCCACGATAATCTGCTGCAGCACGCGCGACGAGCTTGACGCCGTCTGCTCCACCGTTTCCAGCATCCCTTTTATATCTTTGTCAgctttgTACAGTGACCTCGCTGAATCTGAACGTGCTTTTATGCTTGAGAATTATCGACAAATGACAGCAAGATGTAACCAGATTATCCATAGCCAAGTAGGAAATGAAGATGAGACTGGGAAACATGAGCACAGGTCTCATGTGATAGTTGTAACAGATGCTTGCCTTCCTCTCCTCGCTTCTGGGGAGTCTCCAATATCTGGTCGTCTTCTGATTAACTATGAGTTACCAGCAAAGAAGGAAACATATATGAGGCGAATGGCAGCATGCTTAGCACCTGATGGAGTTATTATCAATATGGTTGTTGGTGGCGAAGTAGTAAATCTCAAAAACATTGAAGAAAGCAGCAATATTGTCATAGCAGAGATGCCCATAAATATTTATGAGATTTTGTG 635 0.4441 MAIDATEAASPLPYQNTQFGQSRHFYVAVDRIQFKMETLVDLLSLADRRPCLPTIICCSTRDELDAVCSTVSSIPFISLSALYSDLAESERAFMLENYRQMTARCNQIIHSQVGNEDETGKHEHRSHVIVVTDACLPLLASGESPISGRLLINYELPAKKETYMRRMAACLAPDGVIINMVVGGEVVNLKNIEESSNIVIAEMPINIYEIL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00615 211 PANTHER RNA HELICASE 3 208 - -
Bva08g00615 211 PANTHER INITIATION FACTOR 4A-LIKE PROTEIN 3 208 - -
Bva08g00615 211 Gene3D - 16 211 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00615 Bva-Chr8 3192292 3194979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00615 23 211 Eukaryotic Initiation Factors Gene Family AT3G19760 25.654 7.05e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00615 - K03257 jcu:105639698 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00615 08 3192292 3194979 Bva08g00615 08 3192292 3194979 ECH