Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00590 ATGGCGTCGAAGCCACCGTCGTCACCATCAGCGACATCAGACCCATCCAAGGACCCTTCGACAGAGAGATTACAAGACACAAGTCATACCGatgtatcattatttattgattcttTAAAGAAACAAGTAGCTGCTGAGCGGTGCATTTCCATAAagaaaagaatagaagaaaatagacGGAAGCTGGCTGGTGTCACAAACCATCTCTGCAAATTATCAATGGAAAGGAAAGCCTGCATGAATACCGATATACATAGAAGTTTGGACCCACTGACAAAGATGCAAAACGATGCGATTAATATGAATAATGGTCTTTATGCAAGTAAGGGAGATAAGGAGAGCAATGGTTTCCATGAAGATTGCCATGGTTCTACAGCAGTCCTTTTAGGATCTAATGTCCCTGTGAAGAATACTGTTCGCCCAATCAAGCTACCAGAAGTAAGAAAATTACCAACGTACACTACATGGATTTTTCTGGAAAGGAATCAAAGAATGACGGAGGATCAATCAGTAGTTGGTCGAAGGCGAATATATTACGACCAAAGTGGTGGCGAAGCACTTATATGCAGTGACAGTGAGGAGGAAATAGTTGAGGAAGAGGAGGAGAAAAAAGATTTCATAGAATCTGAACATTACATACTTCGAACAACTATGAAAGAATTTGGTTTGTCTGATCTTGTTCTGGAGTCGCTGGCCCAATGTTTTTCTAGAAACACTTGTGAAGTAAAGATTTTGGAGATAAGAGACACCATCAATCATGTCATACAGGCAAAATGTGAAAGTCTTATCAAAGAAGACAAATCTGGCTGGGGTTCTAAGAATTGGGATGCTGAAGAGAATCCTCAAAGTGGAAATTCTTTTATGGATAAAGATCTTGAAGCAGCACTTGATTCGTTTGACAACCTTTTTTGTCGACGTTGTCTTGTTTTTGATTGCAGATTACATGGATGTTCACAGGATCTTGTCTTTCCTGCTGACAAAAAACCTGCGTGGATCCCACCTGATATggaaattaaaccatgtgggccAAATTGCTTTCAATTGGCGCTGAAGTCAGAGATGTTTGCAAAAATGACGTCTGCTGCCGAGGGTGATGTTGAGGTCAAATGCTCTGGTGATGCTGGTCTGCAAATATCATCTGGGAAGAAGTCTTGTGGTCCTCCTGCTAAGAGACGGTTAAAGTCCAGCCAAAATGAAAGTGCTTCATCCAGTGCAAAGAATATATCCGAAAGTAGTGACTCAGAGAATGGTCCTGGACAGGACATTGCTTCAGCCTCCCTCTCAACGCTGCATAAAACTAAACCTGTGGGGAATGGTGGAGTTGCTAAGAGGAACAGTAAGCGAGCGGCTGAACTTATCCTTGCTTCCATGCATAAGAGGCAGAAGAAAACTATGCCATCCGATTCTGTTGGTGAGGCTCCCACTGGTAGCGATGACAACTTGAGGAGAGAAGAGCTTGTACTTGTAGATGAGAACGTGTGTAAACAAGAATTAACTGATAGTAAATCATGGAAATCTTTCGAAATAGGGCTTCTAGAGAAAGGAACGgaaatttttggtaaaaacaGTTGTTTAATAGCAAGGAATCTTTTAAATGGTCTGAAGACTTGTTGGGAGGTTTTTCATTACATTAATTGCAATGAAGGAAAAATGTCTGGCTCTGCTGCCGATGCCAGAAATTCCCTTCTGGAAGGCTATTCCAagGGTAATAATGAAGTGAGACGAAGATCAAGATTCTTAGGTAGACGGGGGAGAGTCCGTCGCTTGAAGTATACTTGGAAATCTGCTGCTTATCATTCTATTAGGAAAAGGATTACAGAGAGAAAGGACCAGCCCTGTCGGCAGTATAATCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTGCTTGTCTTCAAAATGGAACATGCTGTGAGAAGTACTGTGGATGCCCCAAGACTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAAAGTCAATGTCGAAGTCGGCAATGTCCTTGCTTTGCAGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGCTGTGGTGATGGTTCTCTTGGAATTCCTAGCCAAAGAGGGGATAATTATGAATGTAGAAATATGAAACTACTTCTCAAACAGCAGCAAAGgGTGCTTCTCGGAAAATCGGATGTATCTGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGGAAGCATGAATACCTTGGAGAGTACACTGGAGAGTTAATTTCACACCGGGAAGCAGATAAGCGCGGAAAGATATATGACCGTGAGAATTCGTCGTTTCTGTTTAATCTGAATGATCAGTTTGTTCTTGATGCATTCCGGAAAGGTGACAAATTGAAGTTTGCCAACCATTCTCCTGATCCAAATTGCTACGCGAAGGTTATTATGGTTGCTGGGGATCACAGGGTGGGCATTTTTGCCAAAGAACGGATTAGTGCTGGGGAGGAACTCTTCTACGATTATCGCTATGAGCCAGATAGAGCTCCTGCCTGGGCAAGGAAGCTGGGGGCATCAGGATCAAGAAAAGAGGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTA 2597 0.417 MASKPPSSPSATSDPSKDPSTERLQDTSHTDVSLFIDSLKKQVAAERCISIKKRIEENRRKLAGVTNHLCKLSMERKACMNTDIHRSLDPLTKMQNDAINMNNGLYASKGDKESNGFHEDCHGSTAVLLGSNVPVKNTVRPIKLPEVRKLPTYTTWIFLERNQRMTEDQSVVGRRRIYYDQSGGEALICSDSEEEIVEEEEEKKDFIESEHYILRTTMKEFGLSDLVLESLAQCFSRNTCEVKAKCESLIKEDKSGWGSKNWDAEENPQSGNSFMDKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPADKKPAWIPPDMEIKPCGPNCFQLALKSEMFAKMTSAAEGDVEVKCSGDAGLQISSGKKSCGPPAKRRLKSSQNESASSSAKNISESSDSENGPGQDIASASLSTLHKTKPVGNGGVAKRNSKRAAELILASMHKRQKKTMPSDSVGEAPTGSDDNLRREELVLVDENVCKQELTDSKSWKSFEIGLLEKGTEIFGKNSCLIARNLLNGLKTCWEVFHYINCNEGKMSGSAADARNSLLEGYSKGNNEVRRRSRFLGRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCACLQNGTCCEKYCGCPKTCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGSLGIPSQRGDNYECRNMKLLLKQQQRVLLGKSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAFRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKLGASGSRKEDGAPSSGRAKKLA 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00590 852 MobiDBLite consensus disorder prediction 830 852 - -
Bva08g00590 852 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 30 469 - -
Bva08g00590 852 MobiDBLite consensus disorder prediction 368 432 - -
Bva08g00590 852 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 466 850 - -
Bva08g00590 852 SUPERFAMILY SET domain 577 823 IPR046341 -
Bva08g00590 852 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 852 IPR025778 GO:0031519
Bva08g00590 852 SMART set_7 703 824 IPR001214 GO:0005515
Bva08g00590 852 Pfam CXC domain 641 672 IPR041355 -
Bva08g00590 852 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 466 850 IPR045318 GO:0006338|GO:0018024
Bva08g00590 852 Gene3D SET domain 603 820 IPR046341 -
Bva08g00590 852 MobiDBLite consensus disorder prediction 444 469 - -
Bva08g00590 852 MobiDBLite consensus disorder prediction 1 18 - -
Bva08g00590 852 ProSiteProfiles SET domain profile. 703 818 IPR001214 GO:0005515
Bva08g00590 852 CDD SET_EZH 703 819 - -
Bva08g00590 852 MobiDBLite consensus disorder prediction 378 420 - -
Bva08g00590 852 Coils Coil 189 210 - -
Bva08g00590 852 Pfam SET domain 714 817 IPR001214 GO:0005515
Bva08g00590 852 ProSiteProfiles CXC domain profile. 589 688 IPR026489 -
Bva08g00590 852 SMART CXC_2 637 674 IPR033467 -
Bva08g00590 852 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 30 469 IPR045318 GO:0006338|GO:0018024
Bva08g00590 852 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00590 Bva-Chr8 3054743 3062614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00590 692 821 C2H2 Transcription Factor Family AT2G23740 26.531 1.14e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva08g00590 SET 1.9e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00590 08 3054743 3062614 Bva08g00590 08 3054743 3062614 ECH