Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00585 ATGGACAGTGAAGGAGGAGGGGCTCGCGAGAGAGGAATTTCCACGAGGAAGAGAGGAGTAGAAGGTGAGAGAAGGTACAAAGGGATTAGGATGAGGAAGTGGGGTAAGTGGGTGGCTGAAATTAGGGAACCCAATAAGCGCTCTAGGATTTGGCTAGGGTCATATTCCACGCCGGTAGCGGCGGCGAGGGCTTATGACACGGCGGTGTTTTATCTGAGGGGGCCATCGGCGAGGCTTAATTTCCCGGAGCTTCTGGTAGGAGAAGGGGGCGGTGGAGGCGCTGTTGACATGTCGGCCGCTTCGATAAGGAAGAAAGCCACGGAAGTTGGTGCTAGAGTGGATGCACTTCAAGCGGCTCTCCAACACCATCATCACCATGCATCGGCGGCGCCGGAGCTCATGTCACGAAGTGGTGCCGCCGGAGAGTTTTTGGAACGGGTTGACCTTAATAAGATACCCGAACCCGAGAATTCGGATTGTGAATGGGATAGGAGTTA 497 0.5473 MDSEGGGARERGISTRKRGVEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLVGEGGGGGAVDMSAASIRKKATEVGARVDALQAALQHHHHHASAAPELMSRSGAAGEFLERVDLNKIPEPENSDCEWDRS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00585 165 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Bva08g00585 165 PRINTS Ethylene responsive element binding protein signature 64 84 IPR001471 GO:0003700|GO:0006355
Bva08g00585 165 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Bva08g00585 165 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Bva08g00585 165 Pfam AP2 domain 25 74 IPR001471 GO:0003700|GO:0006355
Bva08g00585 165 Gene3D AP2/ERF domain 24 83 IPR036955 GO:0003700|GO:0006355
Bva08g00585 165 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Bva08g00585 165 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 11 159 - -
Bva08g00585 165 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 11 159 - -
Bva08g00585 165 CDD AP2 25 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00585 Bva-Chr8 3015632 3016560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00585 4 163 AP2-EREBP Transcription Factor Family AT5G67190 57.527 1.48e-61 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva08g00585 AP2 1.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00585 K09286 - zju:107424539 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00585 08 3015632 3016560 Bva08g00585 08 3015632 3016560 ECH