Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00577 ATGAGCCCAAAAACGAAGCCCACTATAGGAAATGGAAGTTCCCTTGTTTCCCTCCCTTCCGAGGGCGACTATTCCAGAAACCGCTGTGGTGACCGGCGTCATTTGCTAATAGTGTTCATCTCCCATTCCTCTGCAACTTCGGGAAGAGATCCAAGATCATCAATCCTCACCGTTCAAGCCAACTCAGGAGCTGAGAAacctaattttattgaatcattCAACAAATGGTTAGTTGACTCATCTAAAAGTGCTGTAAAAGGCATGCAGGTCATGTCACGTCGTTTTGTCTCTCAAAACTACATTAGATACCAGGAAGAAGGATTTGGTCTGGTTATGACATACTACATTACAGAAAACATGATTGCTGTGGGATTTCGAGGTggtgattttgaatttttgTATAATTCATGGGAAACCTTGGTGCTGGGTTTCTATCACAACCATATGGAAGAAGTGATCAAGTTTTTTGAAACTCATCACGAGGGTAAGTACAAAGCGTACAATCTTTGTTCAGAGAGATTGTA 524 0.3989 MSPKTKPTIGNGSSLVSLPSEGDYSRNRCGDRRHLLIVFISHSSATSGRDPRSSILTVQANSGAEKPNFIESFNKWLVDSSKSAVKGMQVMSRRFVSQNYIRYQEEGFGLVMTYYITENMIAVGFRGGDFEFLYNSWETLVLGFYHNHMEEVIKFFETHHEGKYKAYNLCSERL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00577 174 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 59 174 - -
Bva08g00577 174 MobiDBLite consensus disorder prediction 1 23 - -
Bva08g00577 174 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 59 174 - -
Bva08g00577 174 Gene3D Protein tyrosine phosphatase superfamily 87 174 IPR029021 -
Bva08g00577 174 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00577 Bva-Chr8 2978724 2982437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00577 47 174 Protein tyrosine phosphatase (PTP) family AT3G19420 53.125 1.14e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00577 K01110 - gmx:100801622 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00577 08 2978724 2982437 Bva13g00325 13 1521373 1526960 BWGD
Bva08g00577 08 2978724 2982437 Bva11g01742 11 15616630 15623787 ECH
Bva08g00577 08 2978724 2982437 Bva08g00577 08 2978724 2982437 ECH