Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00574 ATGGCTCTCAGAGAAGAAACTCAAGATGTGGAAAACTCTTCGTCAGTCCTTGATGCGCTCCTCTGCGAAGAAGATAGTTTTGAGGAAGATTTTCGTGAGAATGGTATTGAGGGAGAGCGCGATAACTATGATTCAACCATGAGAAAGGCATcatctttgattttgttgGACAAGGACTTGTTTTGGGAAGACGATGAACTCGTCTCCCTAATCTCTAAAGAGGGAGAAACCCACTTCTGTTTCAGTAATCTAATAGGTGACGGGCCTCTGGAAGGAGCTCGTGTTGAGGCTGTGCGATGGATTTCTAAAGTTTGTGCGCACTATGGTTTCACTGCTTTGACTACCGTTCTCGCTGTGAACTACTTTGATAGGTTCATTACAAGCCTAAGGTTTCAGAGGGATAAGCCATGGATGACGCAGCTCACGGCAGTTGCCTGTTTATCTCTGGCTGCCAAAGTGGAGGAGACCCAAGTGCCACTTCTTTTAGACCTGCAAGTGGAGGAATCGAAGTACGTGTTTGAAGCTAAGACTATACAGAGAATGGAGCTTCTAGTGTTATCAACTCTTAAATGGAGGATGAATCTAGTGACCCCAATTTCCTTCTTCGAACACATTGTTAGAAGGCTCGGTTTGAAGTGCCGCTTGCATTGGGAGTTCCTGTGGCAGTGCGAGCGTGTTCTTCTCTTTGTCATTGTGGATTCAATGGTTATGAGTTATCTTCCTTCTACATTAGCTGCTGCTATAATGATCCACGTTATTACAGAGATCGAGCCACGCAAGGCAATGGACTACAGAAATCAGCTTCTGAGTTTACTCAAAATCAGTGAGGAACAAGTGAGCGAGTGCTACAAACTCATAGTGAAACTGTTTGGATGCCAGGAAGAGATGCAACATCTGCACCAGAAACGCAAGCGCCTATCTGTGCCGAGTAGCCCAAGTGGCGTCATTGATGCATCTTTCAGCTATGATAACTCAAATGACTCGTCGACTGTGGTATCATCAGTCTCATTTTCACAAGAGCCAGTGTTAAAGAGGAGCAGAGCTCAGGAACAACAAATGCACTTTCCTTCCCTAAATCATGTGTCTATTGATGTGCTTAATAGCCCTCgtta 1112 0.4424 MALREETQDVENSSSVLDALLCEEDSFEEDFRENGIEGERDNYDSTMRKASSLILLDKDLFWEDDELVSLISKEGETHFCFSNLIGDGPLEGARVEAVRWISKVCAHYGFTALTTVLAVNYFDRFITSLRFQRDKPWMTQLTAVACLSLAAKVEETQVPLLLDLQVEESKYVFEAKTIQRMELLVLSTLKWRMNLVTPISFFEHIVRRLGLKCRLHWEFLWQCERVLLFVIVDSMVMSYLPSTLAAAIMIHVITEIEPRKAMDYRNQLLSLLKISEEQVSECYKLIVKLFGCQEEMQHLHQKRKRLSVPSSPSGVIDASFSYDNSNDSSTVVSSVSFSQEPVLKRSRAQEQQMHFPSLNHVSIDVLNSPR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00574 370 SUPERFAMILY Cyclin-like 61 194 IPR036915 -
Bva08g00574 370 CDD CYCLIN 94 186 IPR013763 -
Bva08g00574 370 Gene3D - 93 194 - -
Bva08g00574 370 PANTHER CYCLINS 2 354 IPR039361 -
Bva08g00574 370 Pfam Cyclin, C-terminal domain 196 303 IPR004367 -
Bva08g00574 370 PANTHER CYCLIN-D3-2 2 354 - -
Bva08g00574 370 SUPERFAMILY Cyclin-like 178 300 IPR036915 -
Bva08g00574 370 SMART Cyclin_C_2 196 324 IPR004367 -
Bva08g00574 370 Gene3D - 195 284 - -
Bva08g00574 370 SMART cyclin_7 99 187 IPR013763 -
Bva08g00574 370 Pfam Cyclin, N-terminal domain 93 194 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00574 Bva-Chr8 2957745 2959679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00574 1 360 Core Cell Cycle Gene Families AT5G67260 51.491 5.51e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00574 K14505 - gmx:100785030 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00574 08 2957745 2959679 Bva13g00327 13 1534512 1536517 BWGD
Bva11g01745 11 15642013 15643651 Bva08g00574 08 2957745 2959679 BWGD
Bva08g00574 08 2957745 2959679 Bva11g01745 11 15642013 15643651 ECH
Bva06g02120 06 14019081 14021032 Bva08g00574 08 2957745 2959679 ECH
Bva10g00685 10 5752452 5754587 Bva08g00574 08 2957745 2959679 ECH
Bva08g00574 08 2957745 2959679 Bva08g00574 08 2957745 2959679 ECH