Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00571 ATGAGCTACCAAGGTGCTGTCCTCCATTTATGGTGGAGAATTCTTGTActtgttcttctttttaatctaTCTTCTGGCCTGAACAAAGACGGGTCTCTGTTGCTTTCTTTCAAGTACTCTGTTCTGAGCGACCCTCTGTTCGTGCTTGGAAACTGGAATTACAGCGACAAGACACCTTGCTCATGGGAAGGTGTTACATGTGCAGATATACCAGGTACAGGTGCAACAAATGCCCAAGCTCGGGTAATTGGTGTAGCTCTGTCGAATTCTCAGCTTCTGGGTCCTATTCCTAACGATCTGGGTTTGATTGAGCACCTCCAAATTCTTGACCTTTCAAACAATTCGCTTAATGGGTCTCTTCCTTCTTCGATTTTTCAGGCTTCTCAGCTCCAATCTCTTAATTTGTCTAACAATTTATTGTCTGGAGAGGTTCCGGATTCCATAGTGCAGCTTAGGAATCTTCAGTTTCTTAACCTTTCTGACAATGCCTTGGCGGGAAAAGCACCCATCAATCTGTCGACTATGCAGAATCTAAGAGTTGCTGCTTTGAAGAGTAATTACTTTTCTGGTGGTCTTCCTAGCGGGCTTCAAACGTTACAAGTTTTGGATCTGTCTTCGAATTTAATTAATGGCCCTCTGCCTCGGGATTTTGGCGGTGCTAATTTGCGTTACTTGAATGTCTCCTACAACAGAATTTACGGGGAGATTCCAGCAGAGTTTGCCGAGAAAATTCCAGCTAATGCTACCCTTGACCTCTCTTTCAACAATCTCACTGGCGAAATTCCAGATTCCATTGTTCTCACAAACCAACAACAGAAGTCATTTTCTGGGAATCCTGATCTGTGCGGAGAACCTACCAATAATCCTTGTCCTATTCCTTCTTCACCGTCTTCCCCACCAAATGTCTCTGGTCCTACATCTCCCCCTGCATTTGCCGCGATTCCAAAGACAATTGACTCTCCCCCTGACTCTGCCAAGTCACCAGGATCGGCCTCTTCTCAGCAAAAACAAAGCGGGCTTCGACGAGGAACAATTATAGGAATCGTAGTTGGAGATGTTGTTGGCATTGGAATTCTAGCTCTGATTTTCTTGTATGTCTATCGgttgaagaggaagaagaaccTGCAGAGTGCAGCAAAGAAGGAAGCCACCGGAGCAAATAGTGATTGGTCATCGTCATCCTCTGAGTCAAGAGGGTTCACAAGGTGGTCTTGCTTGCGTAAAAGAACGGAGGAAGAAGAGTCGTCAGAGAGTTCAGGTAGTTCTGACAGTCACGTAGAAGAACAAAATGCTCACAAGGGTCATGAAAATCAGCGGCAGCAAGAAGCAGGACATAATAAAAAAGGGACCTTGGTAACCGTTGATGGAGAAAAAGAGCTTGAAGTTGAAACACTCCTAAAGGCCTCAGCATATATACTTGGCGCTACTGGTTCCAGCATAATGTACAAAGCTGTGCTTGAAGATGGCACAGCGTTAGCAGTTCGCAGAATTGGTGAGAGCGGCGTGGAACGGTTCAAGGACTTCGAGAACCAGGTTCGGGTCATAGCTAAATTGACGCACCCCAATCTGGTTCGGATTCGTGGCTTCTACTGGGGGATCGACGAGAAGCTCATCATCTACGACTTCGTTCCAAATGGCAGCCTAGCCAATGTTCGTTACAGGAAAGTGGGCTCCTCGCCTTGCCATTTGCCGTGGGAAGTTCGTCTCAAGATAGCAAAAGGCATAGCACGTGGTCTAGCTTACCTCCATGAGAAGAAGCACGTGCATGGAAATTTGAAGCCGAGCAATATATTATTGGGTAATGACATGGAGCCTAAGATAGGTGACTTTGGACTCGAGAGAATTGTTACCGGTGACACGAGCTATAAAGCAGGGGGATCGGCCCGTATTTTTGGTAGCAAGAGGTCAACCGCCTCACGGGATAGCTTCCAAGACATCTCACTTGGGCCTAGCCCAAGCCCAAGTCCCAGCTCCATAGGGGGTGTATCTCCTTACCATGCACCAGAGTCCCTTAGAAATCTCAAGCCTCATCCAAAATGGGATGTTTACTCGTTCGGGGTCATATTTCTTGAGCTTCTAACAGGGAAGATTGTGGTATTGGATGACATGGGCCAAGGACCTGGGCTATTCGTGGAGGATAAGAACCGGGCCTTAAGGATGGCTGACGTGGCAATACGAGCTGACATGGAAGGGAAAGAGGAGTCCTTGTTGGCTTGGTTCAAGTTAGGGTACGGTTGTGTGTCTCTTGTTCCACAGAAAAGGCCTCCAATGAAAGAGGTCCTACAAATTCTTGAAAAAATCCCATCATCAttatcatcttcttcatcctcCCTATATTGTTATGGTCACTA 2351 0.4547 MSYQGAVLHLWWRILVLVLLFNLSSGLNKDGSLLLSFKYSVLSDPLFVLGNWNYSDKTPCSWEGVTCADIPGTGATNAQARVIGVALSNSQLLGPIPNDLGLIEHLQILDLSNNSLNGSLPSSIFQASQLQSLNLSNNLLSGEVPDSIVQLRNLQFLNLSDNALAGKAPINLSTMQNLRVAALKSNYFSGGLPSGLQTLQVLDLSSNLINGPLPRDFGGANLRYLNVSYNRIYGEIPAEFAEKIPANATLDLSFNNLTGEIPDSIVLTNQQQKSFSGNPDLCGEPTNNPCPIPSSPSSPPNVSGPTSPPAFAAIPKTIDSPPDSAKSPGSASSQQKQSGLRRGTIIGIVVGDVVGIGILALIFLYVYRLKRKKNLQSAAKKEATGANSDWSSSSSESRGFTRWSCLRKRTEEEESSESSGSSDSHVEEQNAHKGHENQRQQEAGHNKKGTLVTVDGEKELEVETLLKASAYILGATGSSIMYKAVLEDGTALAVRRIGESGVERFKDFENQVRVIAKLTHPNLVRIRGFYWGIDEKLIIYDFVPNGSLANVRYRKVGSSPCHLPWEVRLKIAKGIARGLAYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDISLGPSPSPSPSSIGGVSPYHAPESLRNLKPHPKWDVYSFGVIFLELLTGKIVVLDDMGQGPGLFVEDKNRALRMADVAIRADMEGKEESLLAWFKLGYGCVSLVPQKRPPMKEVLQILEKIPSSLSSSSSSLYCYGH 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00571 783 Gene3D Transferase(Phosphotransferase) domain 1 543 778 - -
Bva08g00571 783 SUPERFAMILY Protein kinase-like (PK-like) 472 765 IPR011009 -
Bva08g00571 783 MobiDBLite consensus disorder prediction 642 660 - -
Bva08g00571 783 MobiDBLite consensus disorder prediction 642 664 - -
Bva08g00571 783 MobiDBLite consensus disorder prediction 289 306 - -
Bva08g00571 783 Gene3D Phosphorylase Kinase; domain 1 426 542 - -
Bva08g00571 783 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Bva08g00571 783 Pfam Leucine rich repeat 191 232 IPR001611 GO:0005515
Bva08g00571 783 SUPERFAMILY L domain-like 31 285 - -
Bva08g00571 783 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Bva08g00571 783 Gene3D Ribonuclease Inhibitor 197 292 IPR032675 -
Bva08g00571 783 Gene3D Ribonuclease Inhibitor 27 196 IPR032675 -
Bva08g00571 783 MobiDBLite consensus disorder prediction 407 443 - -
Bva08g00571 783 PANTHER BNAC07G16060D PROTEIN 15 771 - -
Bva08g00571 783 ProSiteProfiles Protein kinase domain profile. 467 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00571 783 CDD STKc_IRAK 473 767 - -
Bva08g00571 783 Pfam Protein kinase domain 473 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00571 783 PRINTS Leucine-rich repeat signature 106 119 - -
Bva08g00571 783 PRINTS Leucine-rich repeat signature 151 164 - -
Bva08g00571 783 MobiDBLite consensus disorder prediction 323 339 - -
Bva08g00571 783 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 771 - -
Bva08g00571 783 MobiDBLite consensus disorder prediction 276 339 - -
Bva08g00571 783 MobiDBLite consensus disorder prediction 407 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00571 Bva-Chr8 2945561 2948606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00571 24 783 Receptor kinase-like Gene Family AT4G37250 60.207 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva08g00571 Pkinase 6.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00571 - - ahf:112799685 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00571 08 2945561 2948606 Bva11g01749 11 15652406 15655562 ECH
Bva08g00571 08 2945561 2948606 Bva08g00571 08 2945561 2948606 ECH