Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00569 ATGAGTATGTCGGCTAACAGAAAGGAAATGGAACGGATCAAAGGTCCATGGAGCCCCGAAGAAGACGAAGCTCTGCAGAAACTGGTAGAGAAGCATGGACCCAGGAACTGGTCCTTGATCAGCAAATCCATTCCTGGTCGTTCTGGGAAATCCTGCAGGCTTCGTTGGTGTAATCAGCTGTCTCCTCAGGTGGAACACCGCACCTTCTCACCTGAAGAAGACGAAACTATCATCAGAGCTCATGCCCGTTTCGGCAACAAGTGGGCCACCATCGCCCGTCTTCTATCCGGGCGCACCGATAACGCTATCAAGAATCACTGGAATTCCACCTTGAAGCGCAAGTGTGCTTCCATGATGATCGATAAAAGTGGCGCGGGTGCTACTGGCTTCGATAGCAGCTATGGCCAGCAACCTCTCAAGAGGTCGGTGAGTGCTGGTGCTGCTATTCCTGTCTCCACCGGACTTTATATGATCCCGTCGTCTCCGGGTAGCCCTTCCGGATCCGATGTCAGCGAATCCAGTGTCCCTGTTGCGTCGTCTTCCCATATATATCGACCTGTGCCTCGAACCGGTGGAGTTCTACCTCCCGTAGAAACGACGTCGTCTACAAATGATCCTCCAACATCGTTATCCCTGTCTCTCCCCGGTGTAGATTCCTGCGAGGTCTCGAATCGATCTACAGAGTCAACACAGGCTGTACCACTGGCAAACACCATACCTTTGTTACCGGTAACGGCTCCCTTAGCAGCTCCGATGTCGATGCAACATATGTTTCAGCTGAGTCGCGATGATCGGGTCGTTGAGTGTGGTTCAGCATCAGCTGTGACGCAGAAGGGCTCCGTACCGGTGCCATTCAATTTCAATGCTGAGTTGCTAGCTGTGATGCAGGAAATGATAAGGAAGGAGGTGAGAAATTATATGGCGGAGCAGAAAGGCACTTGTTTTCAGGCAGCTGATGGCTTTAGGAATGCTTCGGTGAAGCATATCGGGGTTAGCAGGATCGATTCGTA 1010 0.5178 MERIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRTFSPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMIDKSGAGATGFDSSYGQQPLKRSVSAGAAIPVSTGLYMIPSSPGSPSGSDVSESSVPVASSSHIYRPVPRTGGVLPPVETTSSTNDPPTSLSLSLPGVDSCEVSNRSTESTQAVPLANTIPLLPVTAPLAAPMSMQHMFQLSRDDRVVECGSASAVTQKGSVPVPFNFNAELLAVMQEMIRKEVRNYMAEQKGTCFQAADGFRNASVKHIGVSRIDS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00569 327 MobiDBLite consensus disorder prediction 151 171 - -
Bva08g00569 327 MobiDBLite consensus disorder prediction 186 220 - -
Bva08g00569 327 Pfam Myb-like DNA-binding domain 8 66 - -
Bva08g00569 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 55 IPR017930 -
Bva08g00569 327 CDD SANT 7 49 IPR001005 -
Bva08g00569 327 SMART sant 56 104 IPR001005 -
Bva08g00569 327 SMART sant 4 53 IPR001005 -
Bva08g00569 327 PANTHER MYB PROTEIN-RELATED 2 298 - -
Bva08g00569 327 ProSiteProfiles Myb-like domain profile. 1 51 IPR001005 -
Bva08g00569 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 106 IPR017930 -
Bva08g00569 327 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 2 298 - -
Bva08g00569 327 CDD SANT 59 102 IPR001005 -
Bva08g00569 327 Gene3D - 4 56 - -
Bva08g00569 327 Gene3D - 58 117 - -
Bva08g00569 327 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Bva08g00569 327 MobiDBLite consensus disorder prediction 151 220 - -
Bva08g00569 327 SUPERFAMILY Homeodomain-like 2 98 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00569 Bva-Chr8 2926077 2927511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00569 1 326 MYB Transcription Factor Family AT4G37260 51.437 2.65e-103 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva08g00569 Myb_DNA-bind_6 3.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00569 K09422 - gmx:780556 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01752 11 15670346 15671962 Bva08g00569 08 2926077 2927511 BWGD
Bva08g00569 08 2926077 2927511 Bva11g01752 11 15670346 15671962 ECH
Bva08g00569 08 2926077 2927511 Bva08g00569 08 2926077 2927511 ECH