Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00568 ATGGAAATCATCCCTTATACAATCCCCTCCACCAAATTCCAATCACTTCTTTTATACAGAAGTGGCAAAATAATTCGATCCTCTAATTCCATTCTCCACCAAATCCAACCCTCCCCCTCTTCTTCAATTTCAGTCAAATACTCGTATTCTTATTCTAGCAAATTTCGTAGTCTTCGTCACCAGCCACTGCGTTGTCTCGCTGAACCCAGCAGTAATCACCATCACGGTGATCATACACACCATGTGCACCACCATCACCACCACCATCATCATCGTCACCATTTAGATAGCAGCGATTGCGCAAATCTTCCTGCACCTCAGAGAGCGATTTTGGCATTCGCTAAAGCCACCAGATGGATTGACTTGGCAAACTTCTTAAGGGAGCATTTGCAATTATGTTGCTGTTCTGCGGCTTTATTTGTGGCAGCTGCCATTTGCCCCTACGTCTTGCCAAAGCCCGGGATCAAGCCTTTTCAAAATGCTCTCATTTTCATCGCTTTTCCTTTAGTTGCGGTTTCTGCATCACTCGATGCTCTGCTTGAAATTACTAGTGGAAAAGTAAACATCCATGTATTGATGGCTCTGGCAGCCTTTGCGTCAGTTTTTATGGGTAACTCTTTGGAAGGAGGGTTACTTCTTGCCATGTTCAATCTGGCGCATATAGCTGAGGAGTATTTCACCAGTCGTTCCATGGTGGACGTTAAAGAGTTGAAGGAAAATTATCCAGATTTTGCCCTTGTTCTGGATACTACTGATGATAAACTTCCTAATACCTTTGACTTGGCATACAAGAGGGTTCCTGTGCATGATGTAACGGTAGGCTCATATATCTTGGTCGGAGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGGAGTGCCACAATTACCATTGAGCACTTGACAGGAGAAGTCAAACCATTGGAGGCCAAAGTTGGAGATAGGATTCCTGGTGGTGCAAGGAACTTAGATGGCAGGATAATAGTAAAGGCAACGAAGACATGGAAGGAATCAACTATCAGCAGAATTGTGCAGTTGACTGAAGAAGCACAGTTGAATAAACCGAAGCTTCAAAGGTGGCTGGATGAATTTGGGGAGCGTTACAGCAAAGTAGTTGTGGTTTTATCAGTTGCTATTGCTATCATTGGGCCACTCATTTTCAAGTGGCCGTTCTTTAGTACAGCAGCTTGCAGAGGATCGGTTTATAGAGCTTTGGGGCTCATGGTAGCAGCATCGCCATGTGCCTTGGCTGTGGCTCCTTTGGCATATGCTACAGCAATTAGCTCCTGCGCAAAAAAGGGGATATTGCTCAAAGGTGGACATGTTCTAGATGCTCTAGCTTCTTGCCAAACTATTGCTTTTGACAAAACGGGAACCCTGACGACTGGTGGACTTGTTTTCAAGGCAATGGAACCAATTTATGGTCATCACACTGGGGGCAATAGATCGAAATTTTCTTCCTGTTGCACTCCTAGCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCCGCCATGGAAAAGGGTACTACTCATCCCATTGGAAGGGCTGTAGTTGACCACAGTAAGGGCAGAGACCTCCCATCTGTTGCAGTTGAAAGTTTCGAGTATTTTCCTGGTAGAGGTCTTGTTGCAACTCTCAACAGCAATGAGACAGGAATTGGAGGGGCTAAGCCGTTGAAAGCATCACTTGGGTCTGTGGATTTTATTACTTCATTTTGTCAGTCTGAAGATGAatcaaaaaagattaaagaagCTGTTAATTCATCTTCTTATGGAAGTGAATTTGTTCACGCTGCCCTCTCAGTCAATCAAAAGGTAACACTAATTCACCTGGAGGATAGACCTCGTCCTGGGGTTTCTAATGTCATACGGGAATTGCAAGATCAAGCAAGGTTTCGTGTAATGATGTTAACTGGTGATCATGAGTCTAGTGCAAGGAGAGTCGCAAATGCTTTGGGTATCAATGAGATTTATTGCAACCTGAAACCTGAGGATAAGCTTAGTCATGTAAAAGACATCTCAAGGGATACAGGTGGTGGTCTAATCATGGTCGGCGAAGGTATCAATGATGCCCCCGCACTTGCTGCTGCAACTGTTGGGATTGTGCTTGCTCAGCGTGCCAGTGCAACTGCCATAGCTGTTGCAGACGTACTATTGCTCCGGGAAAATATTTCTGCAGTGCCATTTTGCATTGCCAAGTCTCGCCAAACAACCTCCCTGATCAAACAAAATGTGGCCCTAGCATTGTCCTGCATTGTCATGGCTTCTCTCCCGTCTGTTTTGGGTTTTCTGCCTCTCTGGTTGACGGTTCTTCTACATGAAGGTGGAACTCTTCTTGTTTGTCTCAATTCTATACGTGCTTTGAACGAACCAGCTTGGTCCTGGAAACATGATGTACTGCTTTCGATTAACGAAGTTAAATCTAGACTACCGTCACAGGGAACAAATGACGTCAGCTCGAGCACCATCAATACCGCAAATTTGTA 2489 0.4456 MEIIPYTIPSTKFQSLLLYRSGKIIRSSNSILHQIQPSPSSSISVKYSYSYSSKFRSLRHQPLRCLAEPSSNHHHGDHTHHVHHHHHHHHHRHHLDSSDCANLPAPQRAILAFAKATRWIDLANFLREHLQLCCCSAALFVAAAICPYVLPKPGIKPFQNALIFIAFPLVAVSASLDALLEITSGKVNIHVLMALAAFASVFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMVDVKELKENYPDFALVLDTTDDKLPNTFDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFQGSATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRIIVKATKTWKESTISRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSVAIAIIGPLIFKWPFFSTAACRGSVYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALASCQTIAFDKTGTLTTGGLVFKAMEPIYGHHTGGNRSKFSSCCTPSCEKEALAVAAAMEKGTTHPIGRAVVDHSKGRDLPSVAVESFEYFPGRGLVATLNSNETGIGGAKPLKASLGSVDFITSFCQSEDESKKIKEAVNSSSYGSEFVHAALSVNQKVTLIHLEDRPRPGVSNVIRELQDQARFRVMMLTGDHESSARRVANALGINEIYCNLKPEDKLSHVKDISRDTGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSCIVMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNEPAWSWKHDVLLSINEVKSRLPSQGTNDVSSSTINTANL 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00568 829 MobiDBLite consensus disorder prediction 69 98 - -
Bva08g00568 829 SFLD Haloacid Dehalogenase 437 738 - -
Bva08g00568 829 SUPERFAMILY Calcium ATPase, transduction domain A 263 348 IPR008250 -
Bva08g00568 829 SUPERFAMILY HAD-like 453 785 IPR036412 -
Bva08g00568 829 PRINTS P-type cation-transporting ATPase superfamily signature 455 469 - -
Bva08g00568 829 PRINTS P-type cation-transporting ATPase superfamily signature 709 721 - -
Bva08g00568 829 PRINTS P-type cation-transporting ATPase superfamily signature 631 641 - -
Bva08g00568 829 PRINTS P-type cation-transporting ATPase superfamily signature 608 619 - -
Bva08g00568 829 PRINTS P-type cation-transporting ATPase superfamily signature 685 704 - -
Bva08g00568 829 CDD P-type_ATPase_HM 133 787 - -
Bva08g00568 829 Gene3D - 448 736 IPR023214 -
Bva08g00568 829 Gene3D - 227 353 - -
Bva08g00568 829 SFLD p-type atpase 437 738 IPR044492 -
Bva08g00568 829 SUPERFAMILY Calcium ATPase, transmembrane domain M 191 770 IPR023298 -
Bva08g00568 829 ProSitePatterns E1-E2 ATPases phosphorylation site. 457 463 IPR018303 -
Bva08g00568 829 Pfam haloacid dehalogenase-like hydrolase 452 698 - -
Bva08g00568 829 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 49 824 - -
Bva08g00568 829 MobiDBLite consensus disorder prediction 76 94 - -
Bva08g00568 829 Gene3D - 466 616 IPR023299 GO:0000166
Bva08g00568 829 Pfam E1-E2 ATPase 263 435 - -
Bva08g00568 829 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 263 477 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva08g00568 829 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 582 765 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva08g00568 829 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 189 787 IPR027256 GO:0006812|GO:0016021|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00568 Bva-Chr8 2915542 2924264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00568 89 813 Primary Pumps ATPases AT4G37270 75.862 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00568 K01534 - gmx:100776309 1247.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00568 08 2915542 2924264 Bva08g00568 08 2915542 2924264 ECH