Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00564 ATGGGAACTCTTCAATATCACAGAATTGATCATATCTCTCtgtttcctctttttcttcttaatttatacATCTCATCGCTTCAGTTCCTCTCATTAGCCTATATCGTCCCTGATAAGTATTTCATCAATTGTGGGTCGGATAGCAATGCAACCGAGCCAGACGGCGTTGGCCCGGTTTTTGCTGGGGAATCTTATGCTGGTTCCCTTGGCTTCTCCTTTCCAAAGCGTGGTGGCACTGACAAACAAACTAATAACTCATCGTTGGTGCCTCCTCTGTATCAAACCGCAAGGACTTTTCAACGAAAATCTTCATATAAGTTCAGCGTTGACAATCATGGCATTTATCTGGTACGCCTCCATTTCTTTGCGTTCTCCTCCCCGATTGATCTGTCTAAGGCTCTGTTCAATGTCTCGGTTTCTCGGTTCTGGCTCTTGAATAATTTCAGTGCcccaaattccaaaaatacAGCTTCAGTAAAggaattttctatttacatCAATAGCAGCAGCTTTATAATCACTTTTACACCTCTGGGATcatcttttgcttttattaaCGCCATAGAACTCTTCCCACTTCCCGGTAATTTCATCCCAGATAAGGCAACACGTGTCAATCCTAGAGGAAATAGTAGCAATTACACCGCTATCCTCTCTTTGATATTGCAAACCAATTTTAGGCTTAATGTTGGAGGCTCTAACATCACAAGACGAAATGATTACTTGTGGAGAAGCTGGGAGTCAGATGATGCTTATCTCAGTAATCCAAAGAAAGCAGAAAGTAACAGCTCCCAAAGTAAAGTTCACTATGAGAAAAATGATGACTCTGGTGGCCCAGTAGCAACCAAGTATATTGCTCCTGATATTGTCTACCAAACTGCCAAGGTGACAAGTGGTTCCCTGAACATAACTTGGGAACTTCGTCTGAAAAGGAATTCTGTTCATCTTGTCCGGCTTCACTTCTGTGACATGTTCAGTTCATCAGTTAATCTCACGGCATTTAATCTATTgataaacaacaaatttattacaaaGATTAATTCCTATGATGTGTCTGATCAGTTGTCTGTTcctttttattatgattttgtgGTAGACTCCGATGACTCTGGGATAATGATTATCGTCATTAAACCTCGCGAAGATTCTTCCTTTCAAAACGCTTTCCTAAATGGGCTAGAAGTGATGGAAATCATGAACACAAAAGGTCCAATTGCTGACGACGGAGACGAACAGAgcataaaaaatcatttatttctgGAACTGGGGTTATCTCTTGGAGCATTTTCCCTGATTTGCATATTAGTAGTTGGGTTCATTTTGCGTCTGAAATTGAGGAAACCGAAGCCTGTTGAGAATTCGGATTGGGTGCCAGTGCCAGTTAAAGGTGGAGGGAGTTCCCACAGCAGGAGGAGTTCCAGTCACGGCTCTAACTTAAATCTTGGACTGAAAATCTCTTTCCGTGAAATTCAACTTGCAACCAAAAACTTCAATGCAAAACGGGTAATTGGGAAGGGTGGCTTTGGTACAGTATATAAGGGAGTTCTGCAGAATGGCCCGACAGTGGCTGTCAAAAGAAGGGAACAAGGGTCAGAAGGACAAGGCCTCTTAGAATTTCAAACTGAAATCatcattttatctaaaattcgTCATCGTCATCTTGTTTCTTTGATTGGGTACTGTGATGAAATGTCTGAGATGATTCTGGTTTATGAGTACATGGAAAAAGGGACACTGAGAGATCATTTATACAATTCAAATGTGCCCAGCTTGTCTTGGAAGGAGAGGCTTGAAATTTGCATTGGTGCTGCGAGAGGTCTAAATTACCTTCACAAAGGATCAGCAGGGGGAATCATTCACCGCGATGTAAAATCCACAAATATATTGTTAGATGAAAACCATGTTGCCAAAGTTGCTGACTTTGGCCTTTCAAGAACAGGTTCAATTGAAAATCAGTCATATGTGTTCACAGTTGTTAAGGGCACCTTTGGTTACCTTGATCCTGAGTACTTTAGGTCTCAGCAGTTGACAGACAAATCTGATGTTTACTCATTCGGGGTAGTTCTTCTGGAAGTGTTGTGTGCAAGACCAGCCATTGATCCGAACCTTCCAAGGGATCAAGCAAACTTGGCTGAGTGGGGAATGCTTTGCAAGAACAAAGGGACACTTGAAGAGATTATAGATCCTTCCATCAAGTGCCAAATAGATATAAAGTCGCTGAGAAAATTTAGTGAGACAGTAGAGAAGTGTTTACAAGAAAATGGTTCTGATAGGCCTAACATGGGCGATGTGATCTGGGACTTGGAGTATGCATTGCAGCTTCAGCGAGGTGCAATAGACAGAAAACAGCACCAGGACAGCTCAAGTGGCGCTTCGGCTTCACTCCAATTGGCCAATATTCGGTGTCTTCCTTCACTCTCTTCGCTAGATGAATCAGATGATATTGCGATCATGAGGGACTATGAATCTGATAGTTGTGCGAATTTGGTTTTCTCTCAGTTGAAAATTGATGATGCCAGATA 2522 0.3989 MGTLQYHRIDHISLFPLFLLNLYISSLQFLSLAYIVPDKYFINCGSDSNATEPDGVGPVFAGESYAGSLGFSFPKRGGTDKQTNNSSLVPPLYQTARTFQRKSSYKFSVDNHGIYLVRLHFFAFSSPIDLSKALFNVSVSRFWLLNNFSAPNSKNTASVKEFSIYINSSSFIITFTPLGSSFAFINAIELFPLPGNFIPDKATRVNPRGNSSNYTAILSLILQTNFRLNVGGSNITRRNDYLWRSWESDDAYLSNPKKAESNSSQSKVHYEKNDDSGGPVATKYIAPDIVYQTAKVTSGSLNITWELRLKRNSVHLVRLHFCDMFSSSVNLTAFNLLINNKFITKINSYDVSDQLSVPFYYDFVVDSDDSGIMIIVIKPREDSSFQNAFLNGLEVMEIMNTKGPIADDGDEQSIKNHLFLELGLSLGAFSLICILVVGFILRLKLRKPKPVENSDWVPVPVKGGGSSHSRRSSSHGSNLNLGLKISFREIQLATKNFNAKRVIGKGGFGTVYKGVLQNGPTVAVKRREQGSEGQGLLEFQTEIIILSKIRHRHLVSLIGYCDEMSEMILVYEYMEKGTLRDHLYNSNVPSLSWKERLEICIGAARGLNYLHKGSAGGIIHRDVKSTNILLDENHVAKVADFGLSRTGSIENQSYVFTVVKGTFGYLDPEYFRSQQLTDKSDVYSFGVVLLEVLCARPAIDPNLPRDQANLAEWGMLCKNKGTLEEIIDPSIKCQIDIKSLRKFSETVEKCLQENGSDRPNMGDVIWDLEYALQLQRGAIDRKQHQDSSSGASASLQLANIRCLPSLSSLDESDDIAIMRDYESDSCANLVFSQLKIDDAR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00564 840 CDD STKc_IRAK 503 769 - -
Bva08g00564 840 Pfam Malectin-like domain 83 397 IPR024788 -
Bva08g00564 840 SUPERFAMILY Protein kinase-like (PK-like) 473 769 IPR011009 -
Bva08g00564 840 PANTHER BNAC03G27170D PROTEIN 33 801 - -
Bva08g00564 840 Pfam Protein tyrosine and serine/threonine kinase 499 765 IPR001245 GO:0004672|GO:0006468
Bva08g00564 840 MobiDBLite consensus disorder prediction 456 477 - -
Bva08g00564 840 PANTHER OS07G0166700 PROTEIN 33 801 IPR045272 GO:0004714|GO:0006468
Bva08g00564 840 Gene3D - 222 399 - -
Bva08g00564 840 Gene3D - 39 192 - -
Bva08g00564 840 MobiDBLite consensus disorder prediction 253 276 - -
Bva08g00564 840 SMART serkin_6 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00564 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Bva08g00564 840 Gene3D Transferase(Phosphotransferase) domain 1 574 794 - -
Bva08g00564 840 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Bva08g00564 840 ProSiteProfiles Protein kinase domain profile. 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00564 840 Gene3D Phosphorylase Kinase; domain 1 465 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00564 Bva-Chr8 2895034 2897965 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00564 10 840 Receptor kinase-like Gene Family AT2G23200 45.624 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva08g00564 Malectin_like 1.1e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00564 - - pop:7476408 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00564 08 2895034 2897965 Bva08g00564 08 2895034 2897965 ECH