Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00547 ATGGCTTGTTTCGCCAGATACAGCAGAGCCATCGGAATCTCTAACCGGCGGCCAATTTCACGAGTACCAATTATACTAAAGAGCAGTAACTTCACGCGTTTTCTCCAATTTATTTATCCGAGCTTCAGAGCTCAGGGATTCGGTACTACTTCTGAGTCAGCTGGAACAAAGTTCCCCAAGGAGAACGCTTATGAGATATTAGGAGTGTCACGGAGCAGCTCATTTTCTGAGATCAAAGCGTGTTTTCGCAAATTGGCGAAAGAAACTCACCCGGACCTTGCTGACTCAAGGGACGATTCCTCTGCGTGTCGACGGTTTGTGCAAATCCTCGCCGCCTATGAGATTCTTTCAGATTCCGAGAAGAGAGCTCATTATGACAGATACTTGTTGTCTCAGGAAAAGCTTGTGCAGAAGCACTCTGGGTTGGGTTCGAAATTGCACGTTTATAAATCAAATGCAACTACATTGAAGGAGATGGAAGTTATTGAATGGTTAAAGTGGTATAGGTTAGCTATAAATGATATACTGTCAGAGAAGAAAGTGTTCGTTGGAACAGGCTATTTTGATGTACTTGAAAGAGACTTCTATTCAGCCATGCATGCAGCATATTATGGCCCTGAAATAGAGTCTATGGAACTTCTTCCTGACTGCTTTGAGGCAGAAGAGAGATCTTCTTACGAAACTCCTGAGGTTTTGCACTTGGTTTCTGGTCGTGATCTTTTTGGGATGGTTTGCGTAGCCAATAAGGTCCCAGAAATATCATACACCAACAGTGAAAAGTTAACTTCCTTCAGATCCTTCCATTCTGGCCTGTGTCAACCAAGGAAGAATGTGAACTTCCAGACAAATGCAGAagattcaaataatattagaatttcACAAGTTACCACTTCTAGAGTTCCAGATAATATATCATATGCATATCAAGATTTAGAATTGCATATATCGGGAAGGGTGGTTGCAGCGGCCTCTAGAGTCCCTCCTAGAAGCTATTCCGATGGGCTGCAGAACAAAAATGCAGAAGACtacattcatatttttcttaatttagatGAATACCCTAAGCATGTTAATAGTGTCTCTTCTCAAAGTTGGTTTGCAAGTGGTGGAGTTGGGACAAGAATTCATTTGGGAACCATAGCTGGACTAGGAACCAGTCCAGATGAAGGTTCCTGTCTTGTCTATAACAGTAGCGGAACAAAGACCCATGTAATCATGAAACATAGAACATTTCTGGTGAAGCATATGCACTGGTACCAGTTGGGAGAGAAGGTTTCCATTTGTGAGTGTAGATGCACCAGAGCCCGCTTACCACCAAGCAAATTTTGGCTATTTGAGCCACGCTGTGCCTTTCATGACATAGGGGGTTGGTACGTAGAAACATATGGCAAAGACAAGAAAGGCCGAACAATAACATCACAAAGGTTCTGGGATGGCTTTGATGATAGCGAGCAATCAGACAGAAGACTTCACCCAGCTGTGTATCTGCTCGCTCTTGCGTATAGAACACTTGATCTTGAATATGCAAAAGTTAGAAGACAAACATTTAGGAATATCGCGGAAGAACAACTGTTTAAAATCCTTCAGTGGTGCAGGAAACTTGTTTG 1607 0.4188 MACFARYSRAIGISNRRPISRVPIILKSSNFTRFLQFIYPSFRAQGFGTTSESAGTKFPKENAYEILGVSRSSSFSEIKACFRKLAKETHPDLADSRDDSSACRRFVQILAAYEILSDSEKRAHYDRYLLSQEKLVQKHSGLGSKLHVYKSNATTLKEMEVIEWLKWYRLAINDILSEKKVFVGTGYFDVLERDFYSAMHAAYYGPEIESMELLPDCFEAEERSSYETPEVLHLVSGRDLFGMVCVANKVPEISYTNSEKLTSFRSFHSGLCQPRKNVNFQTNAEDSNNIRISQVTTSRVPDNISYAYQDLELHISGRVVAAASRVPPRSYSDGLQNKNAEDYIHIFLNLDEYPKHVNSVSSQSWFASGGVGTRIHLGTIAGLGTSPDEGSCLVYNSSGTKTHVIMKHRTFLVKHMHWYQLGEKVSICECRCTRARLPPSKFWLFEPRCAFHDIGGWYVETYGKDKKGRTITSQRFWDGFDDSEQSDRRLHPAVYLLALAYRTLDLEYAKVRRQTFRNIAEEQLFKILQWCRKLV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00547 535 ProSiteProfiles dnaJ domain profile. 62 129 IPR001623 -
Bva08g00547 535 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 28 534 - -
Bva08g00547 535 ProSitePatterns Nt-dnaJ domain signature. 106 125 IPR018253 -
Bva08g00547 535 PRINTS DnaJ domain signature 101 121 IPR001623 -
Bva08g00547 535 PRINTS DnaJ domain signature 82 97 IPR001623 -
Bva08g00547 535 PRINTS DnaJ domain signature 64 82 IPR001623 -
Bva08g00547 535 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Bva08g00547 535 SMART dnaj_3 61 121 IPR001623 -
Bva08g00547 535 Gene3D DnaJ domain 50 147 IPR036869 -
Bva08g00547 535 CDD DnaJ 62 118 IPR001623 -
Bva08g00547 535 Pfam DnaJ domain 62 126 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00547 Bva-Chr8 2806007 2809914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00547 64 128 C2H2 Transcription Factor Family AT1G74250 41.176 1.17e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00547 - - gmx:100805332 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00547 08 2806007 2809914 Bva08g00547 08 2806007 2809914 ECH