Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00530 ATGGCCATACGGCCCTTCCAACGCAACTTCTCGCGTTATAGATTGGTCTCTCTCTTCCGTAATTCTCTttcgttttcttctttctgggGGTCCGAACTTCCGCCGTCCTCTCAATCCTTTTCGCCCATTATTGTCTTACGCCACCTTGCTTCGTCTGCGGCAACGCCGCTCTCAGTCCCCCTCCACCAATATCCGCCACCTCAACCAAACCACGACCGCTCGCTTTCGCTGCTACCACCCGACACCCTGGCGCAGAAGATTGGAAAATCTACTCGCCGTCCCGGCGCTGCCTCTAAGGCCAGGGTTTATGCTGACGTCAACGTTGTTCGTCCCAAGGAATACTGGGACTATGAGTCCCTCACCGTTCAGTGGGGGGAGCAAGATGATTATGAGGTAGTGAGAAAGGTCGGAAGGGGGAAATACAGTGAGGTGTTCGAGGGCGTTCACTGCACGGACAATGAAAAATGCATCATCAAGATACTGAAACcggtgaagaagaagaagATTAAGAGGGAGATCAAAATATTGCAGAATCTTTGTGGAGGGCCCAATATTGTGAAGTTGCTTGACATCGTTAGAGACCAGCAGTCAAAGACTCCTAGccttatttttgaatatgttAATAATACCGATTTTAAAGTGCTCTATCCTACCTTGTCAGACTATGACATACGATATTACATCTATGAACTTCTCAAGGCACTGGATTATTGCCACTCGCAAGGAATCATGCATCGAGATGTAAAGCCACATAATGTAATGATTGACCATGAGCAGCGTAAGTTACGTCTTATAGATTGGGGCCTTGCAGAGTTCTATCATCCtggaaaagaatataatgtTCGCGTTGCCTCAAGATATTTTAAAGGTCCCGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTTTAGATTTGTGGAGCCTTGGTTGTATGTTTGCTGGAATGATATTCCGCAAGGAGCCATTCTTTTACGGACATGATAACTACGATCAGCTGGTCAAAATAGCCAAGGTACTTGGGACAGATGAGTTGAATGCATATCTAAACAAGTATCGCATAGAGTTGGATCCACATCTTGCAGCACTTGTTGGGAGGCATAGCCGGAAGCCATGGACCAAGTTTATTAATGTGGATAATCAACACTTAGCTGTCCCTGAGGCTGTTGACTTTGTTGACAAGTTGCTACGTTATGATCACCAAGAACGCCCTACAGCGAAAGAAGCAATGGCCCATCCTTACTTGAATCCAATTAGAAATGCAGAGAGCAGTAGAACTCGTACACATTG 1289 0.4383 MAIRPFQRNFSRYRLVSLFRNSLSFSSFWGSELPPSSQSFSPIIVLRHLASSAATPLSVPLHQYPPPQPNHDRSLSLLPPDTLAQKIGKSTRRPGAASKARVYADVNVVRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYRIELDPHLAALVGRHSRKPWTKFINVDNQHLAVPEAVDFVDKLLRYDHQERPTAKEAMAHPYLNPIRNAESSRTRTH 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00530 429 Gene3D Transferase(Phosphotransferase) domain 1 207 416 - -
Bva08g00530 429 MobiDBLite consensus disorder prediction 409 429 - -
Bva08g00530 429 CDD STKc_CK2_alpha 111 414 IPR045216 GO:0004674|GO:0006468
Bva08g00530 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Bva08g00530 429 PANTHER CASEIN KINASE II SUBUNIT ALPHA 81 421 IPR045216 GO:0004674|GO:0006468
Bva08g00530 429 PANTHER BNAA04G13490D PROTEIN 81 421 - -
Bva08g00530 429 Gene3D Phosphorylase Kinase; domain 1 121 179 - -
Bva08g00530 429 Gene3D Phosphorylase Kinase; domain 1 183 206 - -
Bva08g00530 429 ProSiteProfiles Protein kinase domain profile. 130 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00530 429 SMART serkin_6 130 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00530 429 Pfam Protein kinase domain 130 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00530 429 SUPERFAMILY Protein kinase-like (PK-like) 103 419 IPR011009 -
Bva08g00530 429 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00530 Bva-Chr8 2725875 2730126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00530 128 418 Core Cell Cycle Gene Families AT1G76540 30.380 1.51e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Bva08g00530 Pkinase 3.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00530 K03097 - vvi:100262741 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00530 08 2725875 2730126 Bva08g00530 08 2725875 2730126 ECH