Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00529 ATGGGAGAGGGCTTGGCAGCGGTGGTTGTGAGAGAGTTCGACCCGAAtaaagacagagagagagtggAAGCTGTTGAAAAAATATGTGAGGTTGGACCCAGTGGTAAGCTCTCTCTCTTCACCGACCTGCGAGGTGACCCAATTTGCAGGGTCCGCCACTCACCTGCTTTTCTCATGCTGGTGGCCGAAATGGGTGACGAGATAGTGGGAATGATAAGGGGTTGCATCAAAACCGTTACGTGTGGGAAGAAGCTCTCTAGAGTTGGAAAAAACAGTCACTCCTCTAACAAAAATTCTGACACCTTCCAAGCCACTGCAAAAGCCGTCCCTGTATGCACCAAACTCGCCTACATCTTGGGCCTGCGCGTTTCCCCTTCTCATCGGAGAATGGGAATAGGGTTGAAGCTTGTGCATAGAATGGAGGACTGGTTCAGAGATAATGGCGCTGAATACTCGTATATTGCGACGGAAAACGACAATTTAGCATCCGTTAATTTGTTCACCGACAAATGCGGATACTCAAATTTCCGTACTCCCTCCATCCTTGTCAACCCTGTTTTTGCTCATCGAGTTGAGGTCTCTAAGAAGGTGACTATCATTCAACTAAGCGCATCTGATGCCGAATACCTCTACCGTCGCCGATTCTCAACCACCGAGTTCTTCCCCCGGGACATTGATTCCGTCCTCAACAACAAACTCAGCCTTGGCACTTTCCTCGCCGTCCCTCGTGGGACCTACCATCCCGAGACATGGCCCGGTTCGGATCGCTTCTTGTCGGACCCACCACAATCCTGGTCAGTCCTCAGCGTCTGGAACTGTATGGACGTTTTCACGCTCGAGATCCGGGGCGCGTCGCTTATAAAGCGCACTCTTGCCAAAACGACCCGGATTGTAGACCGGGCCTTGCCATGGCTTCAGTTACCGTCGATTCCGGATTTTTTCAGGCCGTTTGGTTTCCACTTCGCGTACGGGCTAGGAGGCGAAGGCCCGCAAGGGGTGAAGATGACGAAGGCCTTGTTTGGCTTCGCGCACAATCTAGCCAAGGAACGTGGCTGTGGAGTGGTGGCCACGGAGGTTTCCAGCGGCGAACCGCTGCGGTTCGGTATCCCCCACTGGAAGATGTTATCTTGCGCCGAGGATTTGTGGTGCATGAAGAGGCTCGGAGAAGACTACAGTGACGGGTCGGTGGGTGACTGGACCAAATCCCCACCTGGATTGTCCATTTTCGTTGACCCCAGAGAGTTCTG 1247 0.5213 MGEGLAAVVVREFDPNKDRERVEAVEKICEVGPSGKLSLFTDLRGDPICRVRHSPAFLMLVAEMGDEIVGMIRGCIKTVTCGKKLSRVGKNSHSSNKNSDTFQATAKAVPVCTKLAYILGLRVSPSHRRMGIGLKLVHRMEDWFRDNGAEYSYIATENDNLASVNLFTDKCGYSNFRTPSILVNPVFAHRVEVSKKVTIIQLSASDAEYLYRRRFSTTEFFPRDIDSVLNNKLSLGTFLAVPRGTYHPETWPGSDRFLSDPPQSWSVLSVWNCMDVFTLEIRGASLIKRTLAKTTRIVDRALPWLQLPSIPDFFRPFGFHFAYGLGGEGPQGVKMTKALFGFAHNLAKERGCGVVATEVSSGEPLRFGIPHWKMLSCAEDLWCMKRLGEDYSDGSVGDWTKSPPGLSIFVDPREF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00529 415 Gene3D - 46 178 - -
Bva08g00529 415 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 7 415 - -
Bva08g00529 415 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 198 IPR000182 GO:0016407
Bva08g00529 415 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 50 173 IPR016181 -
Bva08g00529 415 CDD NAT_SF 59 151 - -
Bva08g00529 415 Pfam Acetyltransferase (GNAT) family 53 173 IPR000182 GO:0016407
Bva08g00529 415 PANTHER N-ACETYLTRANSFERASE 7 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00529 Bva-Chr8 2713416 2714924 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Bva08g00529 Acetyltransf_1 1.1e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00529 - - lang:109348839 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00529 08 2713416 2714924 Bva11g01796 11 15907226 15908681 BWGD
Bva08g00529 08 2713416 2714924 Bva08g00529 08 2713416 2714924 ECH