Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00525 ATGGCTAACATGGACAGCAGCTGTTGCAAGTCTCTCCAAGATACCAAGAAATTTACTCCGCTACCACCTTCTTTGCCTCGTTCAGCAGCAGCCAATTGTCCTTGCAAAGGGGGTCTGGTGATAAATAATACACCACCAAGAGGAAGCAGCTATGTCTCTATAGCAACAAGAGATATGTGGGAGCGCTTATTCGGTGAAGGTTATAAAGCAGATGTTTACATTATTACTGACAATGGTGGCATTATTTATGCACATTTTAACATTCTTGCCACGGCTTCTCCTGTAATGAGAGGCATGTTAAAGCAAGTAGGCCGCCATCATCCCCGGCAATCAATCTCAATTCGTGGTGTTCCGCATGATGCAGTCCGAGCTTTTATACGATATCTGTACTCTTCTTGttatgagaaagaagaaatggaagaattcGTATTGCATTTGTTGGTGCTGTCACATGCATTTGCGGTCCCTCACTTGAAGCGTGAATGTGAGAAGAAGCTACAGGAGGGTTTGCTCAACATAGACAATGTAGTCGACATATTACAACTTTCACTTCTGTGCGATGCTCCCTGGCTTAGCCTCATTTGCCACCGCATGATCCTAGAACATTTTAAAGCTGTTTCAGCATCTGAAGGGTGGAAAGCAATGAAGGAAAGCCACCCACTTCTAGAAAAGGAACTTCTGGAATCTgtgattgaagaagaaaatagaaaaaaggaaaggaacaGAAAAATTGAGGAGAGGAAGACCTATATGCAATTATACGAGGCAATGGAAGCTCTTGTTCACATATGTAAAGATGGTTGTCGAACGATTGGTCCTCGTGATAAAGACTTCAAAGCAAACCAAGCACCCTGTAGTTATGCAGCCTGCAAGGGTCTAGAATTGCTTGTTCGTCATTTTGCTGGCTGCAAGTTGAGAGTTCCAGGTGGTTGCATTCATTGCAAGAGGATGTGGCAACTATTGGAGTTGCACTCTCGACTATGTGCTGATTCCAATAGTTGTAGAGTTCCTCTATGCTGGAACTTCAAGGAAAGAATATCAAAACAAAGCAAGAAAGACGAAATTAGGTGGAGAATATTGGTTGAGAAAATCTTAAGAACCAAGGGCATTGCCATAGCATCATGCTTTGTTCGACAATGTATTTA 1145 0.407 MANMDSSCCKSLQDTKKFTPLPPSLPRSAAANCPCKGGLVINNTPPRGSSYVSIATRDMWERLFGEGYKADVYIITDNGGIIYAHFNILATASPVMRGMLKQVGRHHPRQSISIRGVPHDAVRAFIRYLYSSCYEKEEMEEFVLHLLVLSHAFAVPHLKRECEKKLQEGLLNIDNVVDILQLSLLCDAPWLSLICHRMILEHFKAVSASEGWKAMKESHPLLEKELLESVIEEENRKKERNRKIEERKTYMQLYEAMEALVHICKDGCRTIGPRDKDFKANQAPCSYAACKGLELLVRHFAGCKLRVPGGCIHCKRMWQLLELHSRLCADSNSCRVPLCWNFKERISKQSKKDEIRWRILVEKILRTKGIAIASCFVRQCI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00525 381 SUPERFAMILY POZ domain 52 169 IPR011333 -
Bva08g00525 381 SMART TAZ_2 247 340 IPR000197 -
Bva08g00525 381 Pfam TAZ zinc finger 254 339 IPR000197 -
Bva08g00525 381 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 5 378 - -
Bva08g00525 381 Gene3D TAZ domain 245 373 IPR035898 -
Bva08g00525 381 Gene3D - 171 244 - -
Bva08g00525 381 ProSiteProfiles BTB domain profile. 70 138 IPR000210 GO:0005515
Bva08g00525 381 Coils Coil 227 247 - -
Bva08g00525 381 CDD BACK 172 232 - -
Bva08g00525 381 Pfam BTB/POZ domain 67 168 IPR000210 GO:0005515
Bva08g00525 381 SUPERFAMILY TAZ domain 247 348 IPR035898 -
Bva08g00525 381 SMART BTB_4 70 170 IPR000210 GO:0005515
Bva08g00525 381 Gene3D Potassium Channel Kv1.1; Chain A 54 169 IPR011333 -
Bva08g00525 381 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 5 378 IPR044513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00525 Bva-Chr8 2683078 2686794 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Bva08g00525 BTB 2e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00525 - - lja:Lj2g3v1968190.1 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00525 08 2683078 2686794 Bva08g00525 08 2683078 2686794 ECH