Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00523 ATGGAGAGTTATCTAAATGATTTTGAAGTGAAGTCTAAGAACTCGTCAGAGGAGGTTCTTAAGAAATGGAGAGATCTATGTGGGGTTGTAAAGAACCCCAAAAGAAGGTTTCGTTTCACTGCCAATCTCTCCAAGCGTTACGAAGCAGCTGCTATGCGTCGTACCAATCAGGAGAAGCTGAGGGTTGCTGTTTTGGTTTCCAAAGCTGCATTTCAATTTATCCAAGGTGTACAACCGAGTGATTACACTGTACCTGAGGAAGTTGAAGCTGCAGGGTATGATATCTGTGCTGACGAATTGGGGTCTATTGTTGAAGGTCATGATGTAAAGAAGCTGAAATTTCATGGTGGGGTTAACGGAATAGCAGAAAAGATTCGTACATCAACCACTGATGGGCTTAGCATTGACAGCGATTCACTTAATAAGAGACAGCAGATTTATGGAATCAACAAATTTACTGAGAGTGAAGTGCGGAGTTTCTGGGTTTTTGTTTGGGAAGCCCTTCAAGACATGACTCTCATGATCCTTGGAGTGTGTGCTTTTGTGTCTTTGATTGTAGGAATAGCAACGGAAGGATGGCCCAAGGGAGCACATGATGGTCTTGGAATAGTTGCAAGTATCTTATTGGTTGTGTTTGTCACAGCAACAAGTGATTATCGTCAGTCATTACAATTCAAGGATTTAgacaaggagaagaagaagatttcCATTCAGGTCACAAGAAATGGGTATAGGCAGAAAATGTCAATATATGATTTACTTCCTGGTGATATTGTGCATCTTGCTATGGGAGACCAAGTCCCTGCAGATGGACTATTTATTTCAGGATTTTCAGTGTTGATTGATGAGTCAAGTTTAACTGGAGAGAGTGAGCCAGTGATGGTGAGTTCTGAAAatcctttccttctttctggAACTAAGATCCAAGATGGATCGTGCAAGATGCTGGTCACCACTGTCGGAATGAGAACTCAATGGGGCAAGTTGATGGCTACTCTTAGTGAAGGTGGAGATGATGAAACCCCATTGCAGGTGAAACTGAATGGAGTGGCAACCTTTATTGGGAAGATAGGCTTACTCTTCGCTGTGATAACTTTTGCAGTTTTGGTGCAAGGATTATTGAGCCGTAAATTTCAAGAAGGAAGATTCTGGATCTGGAATGGGGATGATGCAATGGAGATGTTGGAATTCTTTGCTATTGCAGTTAccattgttgttgttgctgttCCAGAGGGGCTTCCGTTGGCTGTGACATTGAGCCTTGCATTCGccatgaagaagatgatgaacgACAAGGCCCTTGTCCGACATTTGGCAGCTTGCGAGACAATGGGATCAGCTACAAGTATATGCAGCGACAAGACTGGGACACTGACCACAAATCACATGACTGTTGTCAAAACATGCATTTGTATGAATATCAAGGAAGCGAGCAACAAAGATTCTAGTTTGTGCTCTGAAATTCCAGAATCTGCTGTTAAGCTGCTTCTacaatcaatatttaataacaCTGGCGGAGAGGTTGTCATTAACAAAAATGGCAAACATGAGATATTGGGTACACCAACGGACACTGCAATATTAGAATTTGGCTTGTCACTTGGTGGGGATTTTCAAGCCGAGAGACAAGCATGTAAGCTAGTTAAAGTTGAGCCATTCAACTCCACCAAGAAAAGGATGGGTGTGGTTGTGGAGCTTCCTCAAGGAGGCTTACGTGCCCATTGCAAAGGTGCTTCTGAAATAGTTCTTGCTGCTTGTGATAAGTATATAAACTCCAATGGTGAGGCTGTGCCCCTTGACGAAGCTTCCATCAATCATCTCATGGTCACAATTAACCAATTTGCTAGCGAGGCACTTAGAACTCTATGCATTGCCTATATGGAAATAGGAAACGGGTTTTCTCCACAAGACCCAATTCCTGTTTCTGGATATACCTGCATAGGAATAGTTGGTATCAAAGACCCCGTTCGCCCTGGTGTGAGGGAATCTGTTGCAGTTTGCCGTGCAGCTGGTATCACTGTGCGGATGGTTACTGGGGACAATATTAATACTGCAAAGGCTATAGCCAGGGAATGTGGAATCTTAACTGACGGCATAGCCATTGAAGGTCCGGACtttagagagaagaaaatggaggaaTTGCTTGAACTGATTCCCAAAATTCAGgtTATGGCTCGATCTTCGCCTTTAGACAAGCATACATTAGTGAAACACCTGCGTACCACTTTTGATGAAGTTGTAGCTGTAACTGGCGATGGAACGAATGATGCCCCAGCCCTCCACGAAGCCGACATTGGTCTAGCAATGGGGATTGCCGGAACTGAGGTTGCAAAAGAAAGTGCGGATGTCATAATTCTGGATGATAATTTCTCCACTATTGTGACAGTGGGCAAATGGGGACGTTCAGTTTACATAAATATTCAGAAATTCGTACAGTTCCAGCTGACAGTTAATGTGGTTGCATTGCTTGTAAACTTCACTTCAGCCTGCACGACAGGGAGTGCACCCCTCACAGCGGTTCAATTATTGTGGGTGAACATGATAATGGACACACTAGGAGCACTTGCACTTGCAACTGAACCTCCAAACGATGACTTGATGAAGCGTGCACCGGTGGGAAGGAAGGGGAATTTCATAAGCAATGTCATGTGGAGGAATGTCTTAGGACAAGCATTGTACCAGTTTATCGTGATATGGATTCTTCAGTCAAAAGGAAAATCGATCTTTCATCTCCAAGACTCCGATTCTGATCTAACCTTAAACACAATTATTTTCAACACATTCGTTTTCTGTCAGGTGTTCAACGAGATAAGCTCGCGTGAAATggagaaaattaatgttttcaaaGGCATATTGAATAATCACGTTTTCGCGGGTGTCCTCACTGCAACTGTTATTTCTCAAATCATCATAGTCGAGTTCCTGGGAACCTTTGCAAACACAACACCTCTCACTCTGTCGCAATGGTTGATCTGCATATTCATTGGATTTTTGGGAATGCCCATTGCAGCTTTTTTAAAGAGTATTCCTGTCtg 3035 0.4132 MESYLNDFEVKSKNSSEEVLKKWRDLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQEKLRVAVLVSKAAFQFIQGVQPSDYTVPEEVEAAGYDICADELGSIVEGHDVKKLKFHGGVNGIAEKIRTSTTDGLSIDSDSLNKRQQIYGINKFTESEVRSFWVFVWEALQDMTLMILGVCAFVSLIVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYDLLPGDIVHLAMGDQVPADGLFISGFSVLIDESSLTGESEPVMVSSENPFLLSGTKIQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATFIGKIGLLFAVITFAVLVQGLLSRKFQEGRFWIWNGDDAMEMLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKTCICMNIKEASNKDSSLCSEIPESAVKLLLQSIFNNTGGEVVINKNGKHEILGTPTDTAILEFGLSLGGDFQAERQACKLVKVEPFNSTKKRMGVVVELPQGGLRAHCKGASEIVLAACDKYINSNGEAVPLDEASINHLMVTINQFASEALRTLCIAYMEIGNGFSPQDPIPVSGYTCIGIVGIKDPVRPGVRESVAVCRAAGITVRMVTGDNINTAKAIARECGILTDGIAIEGPDFREKKMEELLELIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVGKWGRSVYINIQKFVQFQLTVNVVALLVNFTSACTTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRAPVGRKGNFISNVMWRNVLGQALYQFIVIWILQSKGKSIFHLQDSDSDLTLNTIIFNTFVFCQVFNEISSREMEKINVFKGILNNHVFAGVLTATVISQIIIVEFLGTFANTTPLTLSQWLICIFIGFLGMPIAAFLKSIPV 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00523 1011 CDD P-type_ATPase_Ca_PMCA-like 140 883 - -
Bva08g00523 1011 Gene3D - 461 655 IPR023299 GO:0000166
Bva08g00523 1011 PANTHER CATION TRANSPORTING ATPASE 8 1010 - -
Bva08g00523 1011 PANTHER CALCIUM-TRANSPORTING ATPASE 1 8 1010 - -
Bva08g00523 1011 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 108 1011 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bva08g00523 1011 Gene3D - 15 75 - -
Bva08g00523 1011 PRINTS H+-transporting ATPase (proton pump) signature 750 766 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva08g00523 1011 PRINTS H+-transporting ATPase (proton pump) signature 782 807 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva08g00523 1011 PRINTS H+-transporting ATPase (proton pump) signature 607 625 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva08g00523 1011 Gene3D - 137 334 - -
Bva08g00523 1011 SFLD p-type atpase 433 802 IPR044492 -
Bva08g00523 1011 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Bva08g00523 1011 Gene3D - 166 1006 - -
Bva08g00523 1011 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 660 IPR023299 GO:0000166
Bva08g00523 1011 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Bva08g00523 1011 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Bva08g00523 1011 PRINTS P-type cation-transporting ATPase superfamily signature 774 786 - -
Bva08g00523 1011 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Bva08g00523 1011 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Bva08g00523 1011 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Bva08g00523 1011 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 720 832 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva08g00523 1011 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 543 696 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva08g00523 1011 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 385 488 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva08g00523 1011 Pfam Cation transport ATPase (P-type) 511 588 - -
Bva08g00523 1011 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1010 IPR023298 -
Bva08g00523 1011 Pfam E1-E2 ATPase 235 429 - -
Bva08g00523 1011 Gene3D - 448 795 IPR023214 -
Bva08g00523 1011 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 48 IPR024750 GO:0005516
Bva08g00523 1011 SUPERFAMILY HAD-like 450 855 IPR036412 -
Bva08g00523 1011 Pfam Cation transporting ATPase, C-terminus 835 1008 IPR006068 -
Bva08g00523 1011 SUPERFAMILY Calcium ATPase, transduction domain A 237 331 IPR008250 -
Bva08g00523 1011 SFLD C1.7: P-type atpase like 433 802 - -
Bva08g00523 1011 Pfam Cation transporter/ATPase, N-terminus 115 183 IPR004014 -
Bva08g00523 1011 Pfam haloacid dehalogenase-like hydrolase 734 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00523 Bva-Chr8 2667875 2672822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00523 1 1011 Primary Pumps ATPases AT4G37640 83.432 0.0 1751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00523 K01537 - gmx:100792691 1736.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00523 08 2667875 2672822 Bva11g01804 11 15951072 15955894 BWGD
Bva08g00523 08 2667875 2672822 Bva08g00523 08 2667875 2672822 ECH