Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00515 ATGGATACCTTGTTTAGGCTTGTGAGTTTCCATCAAGCTGCAGCACAAGCTGATCAATCTCTCAACTCCACCAGCAGAACTTCTAGCAGCTCTAGATCCTCCAGACAAAATAACAACTATCACTACCAGCAAGAAGACGAAGAATGCTTCAACCTTTTCATGGATGAAGAAGACTTGTCCTCGTCTTCTTCTAAGCACTACTATTCTTATCAGCCCCACCCTTCCACCACAGCCACCACCACGCCTACTACTCTCACCCCTACCACTACCTTCAACACAAACACTACTAGCACTCCGACCACCACCActgatttctctttctcaccCACCTGTGACTTCAATTTCGAATTTTCCGGCAAGTGGGCAGCCGAGATCCTCCTGGATACCGCTCGTGCCATCGCCGACAAGAACAGTGCACGTGTCCAGCAACTCATGTGGATGCTCAATGAGCTCAGCTCCCCTTACGGTGATACCGATCAAAAGCTCGCAGCTTATTTTCTCCAAGCCTTGTTTAGCCGCATGACAGACTCCGGTGACCGTACATACCGTACCTTAGCCTCGGCATCTGAGAAAACATGCTCCTTCGAATCAACCAGAAAGATGGTCTTGAAGTTTCAAGAAGTCAGCCCTTGGACAACGTTTGGTCATGTCGCTTGTAACGGTGCTATCTTAGAAGCCTTGGAAGGTGAACCAAAGCTACATATAGTTGATATCAGTAATACATTTTGCACCCAATGGCCCACCCTCCTTGAAGCATTGGCTACTCGCAGCGACGAGACGCCGCATCTCCGTTTAACCACCGTGGTGACCAGCAGAGCCGGTGGCTCCGTCGCAGCTGTTCAGAGGGTCATGAAGGAAATAGGCACTAGAATGGAGAAATTTGCACGGCTTATGTGTGTGCCCTTTAAATTCAATGTCATTCATCATGCGGGTGATCTCTCAGACTTGAACTTGGCCGAATTGGACATTAAAGACGATGAAGCTCTAGCTGTTAACTGTGTGAACACTTTGCATTCTGTGTCAGCGGTTGGTAACCAGAGGGACATGCTGATATCTTCGTTTCGGAGATTACAGCCTAGGATAGTCACTGTCGTGGAAGAAGAAGCTGATCTTGATGTGGGTTATGATGGGTATGAGTTTGTAAAAGGTTTCCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTTGAGAGCTTGGACGAGAGCTTCTCAAGGACGAGCAACGAGCGTTTGATGCTTGAAAGAGCAGCGGGAAGAGCCATCGTTGACTTGGTGGCTTGTTCTCCATCGGAGTCAATAGAGCGACGGGAGTCAGCGGCGCGATGGTCGCAGCGTCTGCATGGTAGTGGGTTCAACTCTCTTTGTTTTAGCGACGAAGTTTGCGACGACGTGAGAGCCTTGTTGAGGAGGTACAAAGAAGGTTGGTCAATGACACAGTGCTCCGATGCCGGTATATTCTTGTCGTGTAAGGATCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTG 1505 0.4857 MDTLFRLVSFHQAAAQADQSLNSTSRTSSSSRSSRQNNNYHYQQEDEECFNLFMDEEDLSSSSSKHYYSYQPHPSTTATTTPTTLTPTTTFNTNTTSTPTTTTDFSFSPTCDFNFEFSGKWAAEILLDTARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRTYRTLASASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAILEALEGEPKLHIVDISNTFCTQWPTLLEALATRSDETPHLRLTTVVTSRAGGSVAAVQRVMKEIGTRMEKFARLMCVPFKFNVIHHAGDLSDLNLAELDIKDDEALAVNCVNTLHSVSAVGNQRDMLISSFRRLQPRIVTVVEEEADLDVGYDGYEFVKGFQECLRWFRVYFESLDESFSRTSNERLMLERAAGRAIVDLVACSPSESIERRESAARWSQRLHGSGFNSLCFSDEVCDDVRALLRRYKEGWSMTQCSDAGIFLSCKDQPVVWASAWRP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00515 501 Pfam GRAS domain family 124 500 IPR005202 -
Bva08g00515 501 PANTHER PROTEIN SHORT-ROOT 1 500 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Bva08g00515 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 500 IPR005202 -
Bva08g00515 501 MobiDBLite consensus disorder prediction 16 38 - -
Bva08g00515 501 MobiDBLite consensus disorder prediction 64 99 - -
Bva08g00515 501 ProSiteProfiles GRAS family profile. 113 500 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00515 Bva-Chr8 2638481 2640190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00515 1 501 GRAS Transcription Factor Family AT4G37650 62.335 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva08g00515 GRAS 7e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00515 - - jre:109002462 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00515 08 2638481 2640190 Bva11g01812 11 15979070 15980961 BWGD
Bva08g00515 08 2638481 2640190 Bva08g00515 08 2638481 2640190 ECH