Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00504 ATGATTGACTATATTTTATCTGATACTTCCTCATCATTCATCATCGTGCCTGTCTCAAAAGACCATCCAACCCTTGACTTGTTCTGCGACGAGGCAGCTAGCGACGTGTTTTCCTCGGATTCCAACATTCCAAAATATGAATCCGATGCGGGTTTCAGTGTCCTATGGGAATCCGATGAAGAAAGCTCTGTTTTGAGCCTATTAGAATCCGAACAGCTTGATCAAACACCGGGAAAACAACAATCACTAAGACAACaattttacaagaaaacaaGCTTCAGAACAGCTCGAGACGAGGCCATAAATTGGATGTTAAAGGTGCATGCTTACTACAGATTTAGCCCTGTGACAGCATACCTTTCTGTGAATTATCTTGAtcgttttcttttatctcacaAATTACCGCAAGATAAAAGATGGCCTATGCAGCTGTTGTCAGTTGCTTGCCTCGCATTGGcagcaaaaatggaagaaacaaGAGTTCCTCTTCTATTAGACTTGCAGGTGATGGAGCCTAGGTTCTTGTTTAAGCCTAAAACAGTTCAAAGAATGGAGCTTTTGGTCATGGCCAGTCTCAAGTGGCGATTGCGCGTCATAACGCCTTTtgattttatccaatttttcatttctaagCTTTCATGTTTTGCTTCCCTCTTTGGTGACTTCAATCATATTATGTCCCGTGTTTCAGATGTTATTATCAGAACATGTATAGTAACGGATTTCTTGGAGTATCCATCGTCCACAATAGCAGCTGCTGCCATGTTATGGGTAACAGATCAATATATTGATGACCAGAAACTAGGCTGCTTCCACAAGAACATAAGCAGAGAGACGGTGCAGAAATGTTGTAACCTTATGAAGCAGAAAGTTCCCCGGTCAGAACAAGATGTTCCAAAGAAAACCTCACTGCCAGCAAGTCCTAATTGCATGCTTGATCACGTAACTACGGCATTAAACAACTA 965 0.3896 MIDYILSDTSSSFIIVPVSKDHPTLDLFCDEAASDVFSSDSNIPKYESDAGFSVLWESDEESSVLSLLESEQLDQTPGKQQSLRQQFYKKTSFRTARDEAINWMLKVHAYYRFSPVTAYLSVNYLDRFLLSHKLPQDKRWPMQLLSVACLALAAKMEETRVPLLLDLQVMEPRFLFKPKTVQRMELLVMASLKWRLRVITPFDFIQFFISKLSCFASLFGDFNHIMSRVSDVIIRTCIVTDFLEYPSSTIAAAAMLWVTDQYIDDQKLGCFHKNISRETVQKCCNLMKQKVPRSEQDVPKKTSLPASPNCMLDHVTTALNN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00504 321 Pfam Cyclin, N-terminal domain 78 196 IPR006671 -
Bva08g00504 321 Gene3D - 92 197 - -
Bva08g00504 321 PANTHER CYCLINS 53 313 IPR039361 -
Bva08g00504 321 SMART cyclin_7 102 190 IPR013763 -
Bva08g00504 321 CDD CYCLIN 97 189 IPR013763 -
Bva08g00504 321 Pfam Cyclin, C-terminal domain 199 295 IPR004367 -
Bva08g00504 321 ProSitePatterns Cyclins signature. 97 128 IPR006671 -
Bva08g00504 321 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 53 313 - -
Bva08g00504 321 SUPERFAMILY Cyclin-like 91 196 IPR036915 -
Bva08g00504 321 Gene3D - 198 276 - -
Bva08g00504 321 SUPERFAMILY Cyclin-like 181 288 IPR036915 -
Bva08g00504 321 SMART Cyclin_C_2 199 310 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00504 Bva-Chr8 2590157 2591773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00504 25 300 Core Cell Cycle Gene Families AT1G70210 40.845 6.10e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00504 K18810 - gmx:100799323 341.273