Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00466 ATGCCACCACTCATTCTCAACCCCTTACCCTTTTTACTGCTAGCTTTACTCTGTTTAAGTTGTTTCTCGCTGGGGTTCTCTCTCTACAGAGACACCCAAATTCTGCTGCGGGTGAAGAATTCTCAGATAGTAGACAAGAATGACAGTCTCAAAGATTGGGTTCCAAACGGATATCACAATCCCTGTAATTGGACCGGCATTAACTGTGATGCAAGGAACCAATCGGTTGTCTCAGTTGATCTCACCTCCACTGGCATTCAAGGTGGGTTTCCGTTTGGTTTTTGCCGGATTCGGACTCTTCAAAACCTTACTCTTGCACAAAATTCTCTGGGTGATATCATCTTGCCCCGGCCGCTGGCTCTCTGCTCCCACCTTCGTCTCTTAGACCTCTCTGGTAACTTGTTTGTTGGAGGGTTGCCGGAATTCTTGTCGGATTTCTCTGAACTAAGACTGCTTAACCTCTCATACAACAACTTCACTGGTGATATTCCGGCCAGCTTTGGTCGGTTTCCACGACTGAGTGTGCTCTGTTTGTACTCAAACTTGCTCAACGGAACAATTCCTCCCTTCTTAGGCAATCTTAGTGAGTTAACTCGATTGGACCTCTCTTATAATCCATTCAAACCAGGACCTTTGCCTTCCGAACTAGGAAATCTGTCTAAGCTTGAGGTTATGATCATCAGAAATGCAAATATTGCCGGGGATTTACCAGACTCAATAGGGAAGCTTGTGTCGCTCAAGAACTTGGATTTGTCTACCAATTCCCTGTCAGGTAAAATTCCGGATGGCATTTCGGGTTTGAGAAATGTAGAGCAAATTGAGCTATATGAGAACCTACTCTCTGGCGAATTACCTCAAGGTTTATCAAACCTTAGCAGTTTACGTAGATTAGATCTCTCTCTAAACAGTCTCACAGGGAAATTGCCAGATAATATCTGTGCATTGCTCCTGACTTCTCTACACTTGAATGACAATTTCCTTGAAGGAGAAATTCCAGCAAGTTTAGCTTCTAATCCAAATTTAGAGGAGTTGCACCTCTTTAACAACAGCTTTACTGGCAAACTGCCGGAAGATCTCGGGCGTAACTCCGAATTGATGGCACTTGATGTCTCTACTAATGACTTCATTGATGAGTTGCCTAGGTATCTCTGTCAAAGGAACAAACTTCAGCGTCTTATTACTTTCAAGAATCGGTTTTCTGGAGCATTGCCCGAGCAATTTGGCGAGTGTCATTCTCTCTATTATGTCAGAATTGAGGACAACCAACTTTCTGGAAACGTGCCACCAAAGTTTTGGGGTCTTCCTCGCCTTCAACTTCTGAGAATGGATAACAATAGATTCGAAGGAATGCTTTCTCCTTCCATCTCCGACGTTTGGGAACTCGAGAAACTTATTTTATCTCGCAACAGATTTTCCGGACACTTGCCAGTGGAAATTTGTGAACTTCATAAGCTAGAGGCGCTTGATATTAGCTTAAACCGGTTCACAGGTGAGGTTCCATCGTGTATAACTGGCTTGAGAAAGTTACAGACCCTTAGAATGCAGGAGAACATGTTTACCGGTGATATTCCCAGTAAAATGAGTTCCTGGGCTGACTTGACCGAATTGAACTTATCCCATAACCGGCTCTCCGGGACAATTCCACCAGAACTGGGTAGCTTGCCGGACTTAACTTATCTTGATCTCGCTGTAAATTTATTGACAGGCGAGATTCCAGCGGAACTGACAAAACTCAAGCTCAATCAATTCAATGTGTCGTTCAACAAATTGTATGGGAAGGTGCCTGCGGCTTTCGATCATCAATTGTATTTGTCCAGTTTACTCGGTAACACGGATCTCTGTAGCCCAGATTTGAAATCTCTGCCTCCGTGTTCCAAATCGAGACCTCTATCTTTGATTGCTGTAATTATTTTAGCTGCCTGTGCTGTGCTTCTTGTTGGGTCTCTGCTCTGGTTCATAAAGAGCAAGTCATTTGGTTTTGGAGACAAATACAAGCGTGCTTATAAGACAAGCACATTCCAAAGAATTGAGTTCAACGAAGAAGATATAGTCCCATTCTTAACCAGCGAGAACCACATTGGCAGTGGGAGTTCTGGTCGGGTATATAGAGTGAAACTGAAAACAGGGGAGACAGTTGCAGTAAAAAAACTGTGGGGAGGTACAGAGAAAGAGGAGACAGAATCAGTGTTCAAGTCGGAGGTTGAAACTCTGGGTCAAATTCGGCATGCTAATATTGTGAAACTGTTATTTAGTTGCAGCGCAGACGATTTGAGGATTTTGGTGTACGAGTACGTGGAGAATGGGAGCTTAGCGGACGTTTTGCATGGTGAAAAATGTGAGCAGCTAATGGATTGGTCGAAGCGCTTCAGCATAGCAGTAGGCGCAGCTCAAGGGTTGGCTTATTTACATCATGATTGTGTGCCGCCAATACTTCACAGAGACGTTAAGAGTAATAACATATTGCTGGACCAAGAGTTTAGGCCTCTCGTAGCAGACTTCGGACTCGCTAAGACCTTGCAGCGAGTAGTCACCGAGGGTGCTGCCCCTATGTCCAGGATCGCTGGATCTCACGGCTACATTGCTCCCGAATATGCTTACACACTTAAAGTAACGGAGAAAAGCGACGTGTATAGTTTCGGTGTGGTGCTGATGGAATTGGTCACTGGCAAGAGGCCCAATGATCCATCTTTTGGCGAGAACAACGACCTAGTGAAGTGGATCACTGAGTCTGCTTTATCATGTCCTGAGGGAGGAAGTGGCAACGTTGAAGGTGGATGGAACAATTTGGCCCATGTTATAGATCCAAGATTGGATCGGTCCACATGTGATTATCAGGAGGTTGACATGGTTTTGAATGTTGCTCTACTTTGCACCTCGGGGTTTCCCATCAATAGACCCTCAATGAGAAGGGTGGTTGAATTGCTCAAGGAATATAAAGTAAGTCGCCCAAAGACATG 2957 0.4457 MPPLILNPLPFLLLALLCLSCFSLGFSLYRDTQILLRVKNSQIVDKNDSLKDWVPNGYHNPCNWTGINCDARNQSVVSVDLTSTGIQGGFPFGFCRIRTLQNLTLAQNSLGDIILPRPLALCSHLRLLDLSGNLFVGGLPEFLSDFSELRLLNLSYNNFTGDIPASFGRFPRLSVLCLYSNLLNGTIPPFLGNLSELTRLDLSYNPFKPGPLPSELGNLSKLEVMIIRNANIAGDLPDSIGKLVSLKNLDLSTNSLSGKIPDGISGLRNVEQIELYENLLSGELPQGLSNLSSLRRLDLSLNSLTGKLPDNICALLLTSLHLNDNFLEGEIPASLASNPNLEELHLFNNSFTGKLPEDLGRNSELMALDVSTNDFIDELPRYLCQRNKLQRLITFKNRFSGALPEQFGECHSLYYVRIEDNQLSGNVPPKFWGLPRLQLLRMDNNRFEGMLSPSISDVWELEKLILSRNRFSGHLPVEICELHKLEALDISLNRFTGEVPSCITGLRKLQTLRMQENMFTGDIPSKMSSWADLTELNLSHNRLSGTIPPELGSLPDLTYLDLAVNLLTGEIPAELTKLKLNQFNVSFNKLYGKVPAAFDHQLYLSSLLGNTDLCSPDLKSLPPCSKSRPLSLIAVIILAACAVLLVGSLLWFIKSKSFGFGDKYKRAYKTSTFQRIEFNEEDIVPFLTSENHIGSGSSGRVYRVKLKTGETVAVKKLWGGTEKEETESVFKSEVETLGQIRHANIVKLLFSCSADDLRILVYEYVENGSLADVLHGEKCEQLMDWSKRFSIAVGAAQGLAYLHHDCVPPILHRDVKSNNILLDQEFRPLVADFGLAKTLQRVVTEGAAPMSRIAGSHGYIAPEYAYTLKVTEKSDVYSFGVVLMELVTGKRPNDPSFGENNDLVKWITESALSCPEGGSGNVEGGWNNLAHVIDPRLDRSTCDYQEVDMVLNVALLCTSGFPINRPSMRRVVELLKEYKVSRPKT 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00466 985 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Bva08g00466 985 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 980 - -
Bva08g00466 985 ProSiteProfiles Leucine-rich repeat profile. 532 555 IPR001611 GO:0005515
Bva08g00466 985 SMART LRR_typ_2 291 315 IPR003591 -
Bva08g00466 985 SMART LRR_typ_2 530 554 IPR003591 -
Bva08g00466 985 SMART LRR_typ_2 243 267 IPR003591 -
Bva08g00466 985 SMART LRR_typ_2 194 219 IPR003591 -
Bva08g00466 985 SMART LRR_typ_2 434 458 IPR003591 -
Bva08g00466 985 SMART LRR_typ_2 339 362 IPR003591 -
Bva08g00466 985 SMART LRR_typ_2 146 170 IPR003591 -
Bva08g00466 985 Pfam Leucine Rich Repeat 293 315 IPR001611 GO:0005515
Bva08g00466 985 Pfam Leucine Rich Repeat 533 554 IPR001611 GO:0005515
Bva08g00466 985 Pfam Leucine rich repeat 148 206 IPR001611 GO:0005515
Bva08g00466 985 SMART serkin_6 687 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00466 985 SUPERFAMILY L domain-like 59 373 - -
Bva08g00466 985 Gene3D Ribonuclease Inhibitor 287 626 IPR032675 -
Bva08g00466 985 Gene3D Ribonuclease Inhibitor 181 286 IPR032675 -
Bva08g00466 985 Gene3D Ribonuclease Inhibitor 28 180 IPR032675 -
Bva08g00466 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Bva08g00466 985 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 18 980 - -
Bva08g00466 985 Pfam Protein kinase domain 689 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00466 985 SUPERFAMILY L domain-like 315 622 - -
Bva08g00466 985 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Bva08g00466 985 ProSiteProfiles Protein kinase domain profile. 687 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00466 985 Gene3D Phosphorylase Kinase; domain 1 670 764 - -
Bva08g00466 985 Gene3D Transferase(Phosphotransferase) domain 1 765 984 - -
Bva08g00466 985 SUPERFAMILY Protein kinase-like (PK-like) 687 975 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00466 Bva-Chr8 2399264 2402493 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00466 31 979 Receptor kinase-like Gene Family AT5G65710 56.936 0.0 1065
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva08g00466 Pkinase 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00466 - - gmx:100813889 1325.46