Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00464 ATGCGACTACTCCTCTTgcttctcctcctcctccactTCCACCACACCCTCTCTGCAACTGCGCGCATGTCAGAGTATCGTGCGCTGCTCTCTCTCAAGGCAGCCATTACCGACGACCCCCAATCTGCTCTTTCCACTTGGAACGCCTCAACCAGTCACTGCACCTGGTCCGGCGTCACCTGTGATTCCCGTCGACACGTTATCGCTCTTAACCTCACCGGTCTCGCCCTCTCCGGCTTACTTTCAAATGATATAGCCCACCTCCCTCTCCTCTCTAATCTCTCTGTCGCCGATAATCAGTTCTCTGGACCCATTCCCCCCGAGATCTCCACAATAACTGGTCTCCGTTTCCTTAACATTTCTAACAATGTATTCAATGGTACTTTCCCTTCCGAGCTCTCCCAGCTCAAGAATCTTCAGGTCCTCGACTTGTATAACAACAACATGACTGGTGACCTCCCACTCGCCGTCACCCAGATGCCAAATCTACGACATTTGCATCTCGGAGGTAACTTTTTTTCAGGTCAGATCCCGCCGGAGTACGGAGGATGGCAACATTTGGAATATTTGGGTGTTTCCGGCAACGAGCTGACCGGCAAAATACCGCCGGAGATCGGGAACTTGACCAACCTCCGGGAGCTCTATATTGGATACTACAACACTTATGAGAATGGCATTCCGCCTGAGATTGGCAACTTGTCCGAATTAGTGAGGCTTGACGCGGCCAACTCTGGATTGACCGGCGAGATACCGCCAGAAATCGGGAAGCTTCAAAAACTCGATACTCTATTTCTTCAAGTTAATGCGCTTTCAGGGTCTCTGACGCCTGAGCTTGGGATGTTGAAGAGCCTGAAATCCATGGATTTATCCAACAATATGCTTGCAGGTGAGATTCCGGAGGCTTTTGCTGAGCTCAAAAACCTGACCCTTCTGAACCTTTTCAGGAATAAGCTTCATGGGGCGATTCCTGAGTTCATTGGTGAGTTGCCATCTCTGGAGGTGCTGCAGCTTTGGGAGAACAACTTCACTGGGAGCATTCCTCAGGGTTTGGGGAAGAATGGGAGACTTGTACTTGTTGATCTTTCTTCAAACAAATTGACGGGAACTCTGCCTCCTGACATGTGCTCTGGGAATCACCTACAGACTCTTATAACTctgaataatttcttatttggtCCTATTCCTGAATCGTTAGGGAGGTGCGAGTCGCTAACTCGGGTCCGGATGGGAGAAAACTTTCTTAATGGGTCAATCCCAAAAGGTCTCTTTGGGCTTGCCAAACTTACTCAGGTGGAGCTGCAGGACAATCTTCTCTCAGGTCAGTTTCCGGATGCGGATTCGATATCTGTTAATCTTGGTCAGGTTAGTCTGTCCAACAACCAGCTTTCTGGGCCGTTGCCGCCGACAATTGGTAACTTTTCCGGCATGCAGAAACTCCTACTTGATGGCAACAAGTTCTCGGGTAGAATCCCTCCTGAGATTGGGAGATTACAGCAACTCTCAAAGATAGATTTTAGCCACAATAAGTTTTCAGGCCCTGTTGCTCCAGAAATTAGTCAGTGCAAGCTGTTGACGTTCGTTGATCTTAGTCGTAATGAGCTTTCTGGTGAAATTCCGAATAAGATCACTGCTATGCGCATATTGAATTACTTGAATCTTTCGAGAAATCATCTAGTTGGTAGCATTCCGGCATCAATATCAAGCATGCAAAGCTTAACTTCTGTTGATTTTTCATATAACAATCTCTCTGGTTTGGTTCCTGGCACCGGTCAATTCAGCTACTTCAACTACACATCGTTTCTGGGTAACCCTGACCTTTGTGGCCCGTATTTGGGTCCTTGCAAGGATGGCGTTGCCAATGGTGCCCACCAACCACACGCTAAAGGTCCACTCTCAGCTTCTCTGAAGCTCTTGCTGGTTATTGGGTTGCTTCTATGTTCGATTGCATTTGCAGTTGCTGCAATAATTAAAGCACGGTCATTGAAGAAGGCCAGTGAATCTCGTGCATGGAAATTGACTGCATTCCAACGTTTAGACTTCACCGTTGATGATGTTTTGGATTGTTTGAAGGAGGACAACATCATAGGGAAAGGAGGTGCAGGTATTGTCTACAAGGGGACAATGCCAAATGGGGATCAGGTTGCTGTAAAAAGGTTGCCAGCCATGAGCAGAGGGTCATCCCATGATCATGGGTTCAATGCAGAAATCCAGACATTAGGGAGGATCCGACACAGGCACATTGTTAGGTTACTTGGCTTCTGTTCGAACCATGAAACAAATCTTCTAGTCTATGAATACATGCCCAACGGAAGTTTGGGTGAAGTTCTTCATGGTAAGAAAGGGGGTCATTTACATTGGGATACAAGGTATAAAATTGCTGTGGAGGCTGCGAAGGGACTTTGCTATTTACACCATGACTGTTCGCCGCTAATCGTTCATCGAGATGTAAAATCAAACAACATCCTTCTTGACTCCAGTTTTGAAGCTCATGTTGCTGATTTTGGGCTTGCAAAGTTTCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATTGCCGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACACTTAAAGTTGATGAGAAAAGTGACGTGTACAGCTTCGGTGTGGTTCTTTTAGAGCTAATTACGGGCAGGAAACCAGTTGGAGAATTTGGTGATGGTGTGGACATTGTGCAATGGGTGAGGAAAATGACAGACTCAAAGAAGGAAGGAGTTCTGAAAGTTTCTGATCCTAGACTTTCCTCGGTTCCCCTTCATGAAGTGATGCATGTCTTTTATGTGGCCATGCTTTGTGTTGAAGAACAGGCTGTCGAGCGACCAACTATGCGTGAAGTTGTTCAAATTCTAACCGAGCTTCCAAAAGCACCAGGTTCAAAACAGGGGGACATAACCATCACGGAGTCCTCTCTGTCATCGGCCAACGCTTCAGACTCTCCGGCGGCGTCCAAAGAAGTTAAAGATAATCAACATCCTTCTCAGTCACCACCACCTGATCTACTTAGCATTTG 3041 0.463 MRLLLLLLLLLHFHHTLSATARMSEYRALLSLKAAITDDPQSALSTWNASTSHCTWSGVTCDSRRHVIALNLTGLALSGLLSNDIAHLPLLSNLSVADNQFSGPIPPEISTITGLRFLNISNNVFNGTFPSELSQLKNLQVLDLYNNNMTGDLPLAVTQMPNLRHLHLGGNFFSGQIPPEYGGWQHLEYLGVSGNELTGKIPPEIGNLTNLRELYIGYYNTYENGIPPEIGNLSELVRLDAANSGLTGEIPPEIGKLQKLDTLFLQVNALSGSLTPELGMLKSLKSMDLSNNMLAGEIPEAFAELKNLTLLNLFRNKLHGAIPEFIGELPSLEVLQLWENNFTGSIPQGLGKNGRLVLVDLSSNKLTGTLPPDMCSGNHLQTLITLNNFLFGPIPESLGRCESLTRVRMGENFLNGSIPKGLFGLAKLTQVELQDNLLSGQFPDADSISVNLGQVSLSNNQLSGPLPPTIGNFSGMQKLLLDGNKFSGRIPPEIGRLQQLSKIDFSHNKFSGPVAPEISQCKLLTFVDLSRNELSGEIPNKITAMRILNYLNLSRNHLVGSIPASISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKDGVANGAHQPHAKGPLSASLKLLLVIGLLLCSIAFAVAAIIKARSLKKASESRAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGTMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSKKEGVLKVSDPRLSSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKAPGSKQGDITITESSLSSANASDSPAASKEVKDNQHPSQSPPPDLLSI 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00464 1013 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00464 1013 SMART LRR_typ_2 329 353 IPR003591 -
Bva08g00464 1013 SMART LRR_typ_2 281 304 IPR003591 -
Bva08g00464 1013 SMART LRR_typ_2 136 159 IPR003591 -
Bva08g00464 1013 SMART LRR_typ_2 569 592 IPR003591 -
Bva08g00464 1013 SMART LRR_typ_2 473 497 IPR003591 -
Bva08g00464 1013 SMART LRR_typ_2 160 183 IPR003591 -
Bva08g00464 1013 Gene3D Transferase(Phosphotransferase) domain 1 767 980 - -
Bva08g00464 1013 Gene3D Ribonuclease Inhibitor 223 342 IPR032675 -
Bva08g00464 1013 SMART serkin_6 689 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva08g00464 1013 Gene3D Ribonuclease Inhibitor 343 618 IPR032675 -
Bva08g00464 1013 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Bva08g00464 1013 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 1000 - -
Bva08g00464 1013 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Bva08g00464 1013 SUPERFAMILY Protein kinase-like (PK-like) 681 960 IPR011009 -
Bva08g00464 1013 Pfam Leucine Rich repeats (2 copies) 137 177 IPR025875 -
Bva08g00464 1013 MobiDBLite consensus disorder prediction 967 1013 - -
Bva08g00464 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Bva08g00464 1013 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1000 - -
Bva08g00464 1013 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Bva08g00464 1013 SUPERFAMILY L domain-like 298 614 - -
Bva08g00464 1013 SUPERFAMILY RNI-like 70 391 - -
Bva08g00464 1013 MobiDBLite consensus disorder prediction 972 1013 - -
Bva08g00464 1013 Gene3D Ribonuclease Inhibitor 22 222 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00464 Bva-Chr8 2383240 2387122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00464 12 990 Receptor kinase-like Gene Family AT5G65700 82.860 0.0 1651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva08g00464 PK_Tyr_Ser-Thr 6.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00464 - - ccaj:109800149 1706.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00464 08 2383240 2387122 Bva11g01858 11 16203147 16207466 BWGD
Bva08g00464 08 2383240 2387122 Bva08g00464 08 2383240 2387122 ECH