Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00461 atggaaatttcatcaaactaCTTCCCTGAACTAGGAATGGAGGATAACATTTTGCTTCATCCTCATCCGTACCAGATGTATTCTTCTGCATTCGAAACCGACTTCGACTTTTCCTCAGGGGAATCAACCTATTTTCACCCCACTGATCAATGGGTTGCCACTGCAGCAACGAAGCATGACCTCGAGACCAATACCGGCTGGAACTCTTCCGGGACTGATTTCATAGTAGCTTCTAAATGTTCTGCATCTTCCGCCACAGATTTCATAATCTCTTTTGACAAGACAAACCTATCTTCAGTCGCTAATTTACACCTCGATTCCTTAAAATATGATCAGCAAAGATCTAGAAAGGCTGCTGCCATGACTAGAAATTCAGTCCAAGCTCATGAACACGTAGAGGCCGAACGTAAACGAAGAGAAAAGCTCAACCAGAGATTTATAGCTCTTTCAGCACTTGTTCCTTGCCTCAAAAAGATGGACAAGGCTTCTGTTCTGGGAGATGCCATCAATTATGTGGAACAACTCCAGGAACAAGTGAAGACTCTGGAGGAACAGTTgtccaagaaaaaaagggaatcAACAGTTTGTCTTAAGAGACATTTTCTATTTGCTGAAAACGACGACGAAACTGAAAACAGCTCTGATGAGCTACTGCACGAAATTGAAGCAAGAGTTTCTGGTAAAGACGTGCTCATTATGATCCACTGTGAGAAACACCATGGATGTGCAGCGGCTACCATAGTGAGCCAATTAAACAAACTTGGTCTGACTCTTCAAAATAGCAGCATTTTACCCTTTCAGAATAACACTCTTCACATAACCATTGTCGCTCAGATGGACAAGGAATACTACATGACAGCAAAAGATCTCGTAGAAAGCCTAAGGCAGGCTTTGAGGCAGTTCATCTG 908 0.4108 MEISSNYFPELGMEDNILLHPHPYQMYSSAFETDFDFSSGESTYFHPTDQWVATAATKHDLETNTGWNSSGTDFIVASKCSASSATDFIISFDKTNLSSVANLHLDSLKYDQQRSRKAAAMTRNSVQAHEHVEAERKRREKLNQRFIALSALVPCLKKMDKASVLGDAINYVEQLQEQVKTLEEQLSKKKRESTVCLKRHFLFAENDDETENSSDELLHEIEARVSGKDVLIMIHCEKHHGCAAATIVSQLNKLGLTLQNSSILPFQNNTLHITIVAQMDKEYYMTAKDLVESLRQALRQFI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00461 302 Coils Coil 165 192 - -
Bva08g00461 302 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Bva08g00461 302 SMART finulus 132 181 IPR011598 GO:0046983
Bva08g00461 302 PANTHER BHLH TRANSCRIPTION FACTOR 55 301 - -
Bva08g00461 302 Gene3D - 115 193 IPR036638 GO:0046983
Bva08g00461 302 PANTHER TRANSCRIPTION FACTOR NAI1 55 301 - -
Bva08g00461 302 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 197 IPR036638 GO:0046983
Bva08g00461 302 Pfam Helix-loop-helix DNA-binding domain 130 176 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00461 Bva-Chr8 2367880 2369442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00461 41 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.925 1.59e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva08g00461 HLH 3.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00461 - - mtr:MTR_4g097920 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00461 08 2367880 2369442 Bva08g00461 08 2367880 2369442 ECH